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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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408..932
-----------------
DNA (525bp)
protein (175aa)
AAA family ATPase n=1 Tax=uncultured gamma proteobacterium RepID=H5SAD8_9GAMM
ATPase AAA Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ATPase AAA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1183..2049
-----------------
DNA (867bp)
protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4X8_9CLOT
putative xylanase/chitin deacetylase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
putative xylanase/chitin deacetylase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2142..3617
-----------------
DNA (1476bp)
protein (492aa)
UbiD family decarboxylase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
UbiD family decarboxylases id=2108067 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3635..4891)
-----------------
DNA (1257bp)
protein (419aa)
Major facilitator superfamily MFS_1 id=2108069 bin=GWD2_Deltaproteobacteria_55_8 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily protein Tax=GWD2_Deltaproteobacteria_55_8_curated
major facilitator superfamily protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5037..5765
-----------------
DNA (729bp)
protein (243aa)
maleate cis-trans isomerase; K01799 maleate isomerase [EC:5.2.1.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
maleate cis-trans isomerase id=2108070 bin=GWD2_Deltaproteobacteria_55_8 species=Thermococcus zilligii genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5762..7336)
-----------------
DNA (1575bp)
protein (525aa)
von Willebrand factor type A id=2108071 bin=GWD2_Deltaproteobacteria_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
von Willebrand factor type A Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
von Willebrand factor type A
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7354..8472)
-----------------
DNA (1119bp)
protein (373aa)
AAA ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ATPase associated with various cellular activities AAA_5 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHK9_HALO1
AAA ATPase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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8880..10061
-----------------
DNA (1182bp)
protein (394aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
Probable acyl-CoA transferase/carnitine dehydrastase id=1929879 bin=GWD2_Deltaproteobacteria_55_8 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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10093..11205
-----------------
DNA (1113bp)
protein (371aa)
Peptidase M24 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z7_VARPS
peptidase M24 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
peptidase M24
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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11608..12762
-----------------
DNA (1155bp)
protein (385aa)
Mandelate racemase/muconate lactonizing protein; K01856 muconate cycloisomerase [EC:5.5.1.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Mandelate racemase/muconate lactonizing protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z8_VARPS
Mandelate racemase/muconate lactonizing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12840..13946
-----------------
DNA (1107bp)
protein (369aa)
putative opine dehydrogenase (EC:1.5.1.28)
NADP transhydrogenase subunit alpha n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I1A0_9CLOT
NAD/NADP octopine/nopaline dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1154_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13961..14791
-----------------
DNA (831bp)
protein (277aa)
Luciferase-like n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRR2_RHOP2
luciferase-like protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
luciferase-like protein
Displaying 12 items

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