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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(2..313)
DNA (312bp) protein (104aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) id=12555552 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-directed RNA polymerase subunit alpha
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(643..1332)
DNA (690bp) protein (230aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) id=1880794 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter periplasmic protein; K15580 oligopeptide transport system substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1349..2380
DNA (1032bp) protein (344aa)
membrane dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase id=1880792 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2485..3429
DNA (945bp) protein (315aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2QDZ7_9RHIZ
ABC transporter substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
NMT1/THI5 like domain protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3522..4970
DNA (1449bp) protein (483aa)
ubiD2; 4-hydroxybenzoate decarboxylase UbiD (EC:4.1.1.61) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ubiD2; 4-hydroxybenzoate decarboxylase UbiD (EC:4.1.1.61)
3-polyprenyl-4-hydroxybenzoate decarboxylase id=1798648 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5085..5231
DNA (147bp) protein (49aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5323..7617
DNA (2295bp) protein (765aa)
Xanthine dehydrogenase, molybdenum binding subunit (EC:1.17.1.4) Tax=GWD2_Deltaproteobacteria_55_8_curated
Xanthine dehydrogenase, molybdenum binding subunit (EC:1.17.1.4)
Putative aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T365_9ZZZZ
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_3306_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7774..8514
DNA (741bp) protein (247aa)
Putative Helix-turn-helix, type 11 domain protein id=1863106 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Helix-turn-helix, type 11 domain protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Helix-turn-helix, type 11 domain protein
Displaying 8 items

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