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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..126)
DNA (126bp) protein (42aa)
Uncharacterized protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123..1565)
DNA (1443bp) protein (481aa)
GspL n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QK71_DESAH
gspL; protein GspL; K02461 general secretion pathway protein L Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
gspL; protein GspL
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1656..2639)
DNA (984bp) protein (328aa)
Type II secretion system protein K n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYG4_9DELT
gspK2; protein GspK2; K02460 general secretion pathway protein K Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
gspK2; protein GspK2
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2636..3271)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJH2_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3268..3678)
DNA (411bp) protein (137aa)
Prepilin-type N-terminal cleavage/methylation domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYG2_9DELT
general secretion pathway protein H; K02458 general secretion pathway protein I Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
general secretion pathway protein H
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..4139)
DNA (465bp) protein (155aa)
putative general secretion pathway protein H n=1 Tax=Marinobacterium stanieri RepID=UPI0002557867
xpsH_[H]; General secretion pathway protein H Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
xpsH_[H]; General secretion pathway protein H
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..4605)
DNA (489bp) protein (163aa)
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=GWD2_Deltaproteobacteria_55_8_curated
General secretion pathway protein G id=1986394 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
general secretion pathway protein G
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4589..5809)
DNA (1221bp) protein (407aa)
gspF; general secretory pathway component, cryptic Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
General secretion pathway protein F id=1986390 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gspF; general secretory pathway component, cryptic
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5899..7587)
DNA (1689bp) protein (563aa)
type II secretion system protein E; K02454 general secretion pathway protein E Tax=GWD2_Deltaproteobacteria_55_8_curated
Type II secretion system protein E (GspE) id=1986388 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
type II secretion system protein E
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7596..7955)
DNA (360bp) protein (120aa)
Cupin 2 conserved barrel domain protein id=1986386 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cupin domain-containing protein Tax=GWD2_Deltaproteobacteria_55_8_curated
cupin domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7994..10264)
DNA (2271bp) protein (757aa)
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Organic solvent tolerance protein id=1986384 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipopolysaccharide biosynthesis protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10287..11609)
DNA (1323bp) protein (441aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
FolC bifunctional protein id=1986382 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12517)
DNA (819bp) protein (273aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Geobacter sp. (strain M21) RepID=TRPA_GEOSM
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12612..13796)
DNA (1185bp) protein (395aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Tryptophan synthase beta chain n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7C7_GEODF
tryptophan synthase subunit beta
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_558_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13789..14388)
DNA (600bp) protein (200aa)
N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase id=4812096 bin=GWC2_Nitrospirae_57_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Displaying 15 items

View Taxonomy