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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_1
unknown

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(475..1233)
DNA (759bp) protein (253aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RNA methyltransferase, TrmH family, group 3 id=1948346 bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TrmH family RNA methyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1300..2514
DNA (1215bp) protein (405aa)
YjgP/YjgQ family permease Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Permease YjgP/YjgQ family protein id=1948349 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
membrane protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2522..3631
DNA (1110bp) protein (370aa)
Permease id=1875757 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
permease Tax=GWD2_Deltaproteobacteria_55_8_curated
permease
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3641..4666)
DNA (1026bp) protein (342aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWD2_Deltaproteobacteria_55_8_curated
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase id=1875759 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4714..5106)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 id=1875762 bin=GWD2_Deltaproteobacteria_55_8 species=Idiomarina xiamenensis genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
30S ribosomal protein S9
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5118..5543)
DNA (426bp) protein (142aa)
50S ribosomal protein L13 id=1875764 bin=GWD2_Deltaproteobacteria_55_8 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=GWD2_Deltaproteobacteria_55_8_curated
rplM; 50S ribosomal protein L13
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_trna_2
unknown

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comp(5600..5673)
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_trna_1
unknown

Not on your lists

comp(5788..5859)
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5960..6232)
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein id=1875766 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
histone family protein DNA-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6342..8810)
DNA (2469bp) protein (823aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=GWD2_Deltaproteobacteria_55_8_curated
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Lon protease id=1875770 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8824..10077)
DNA (1254bp) protein (418aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ATP-dependent Clp protease ATP-binding subunit ClpX id=1875775 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
clpX; ATP-dependent protease ATP-binding subunit ClpX
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10090..10689)
DNA (600bp) protein (200aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=1875780 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1009_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10722..12059)
DNA (1338bp) protein (446aa)
Trigger factor id=1875784 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tig; trigger factor; K03545 trigger factor Tax=GWD2_Deltaproteobacteria_55_8_curated
tig; ribosome-associated peptidylprolyl cis-trans isomerase, FKBP-type (trigger factor)
Displaying 14 items

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