ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..790
-----------------
DNA (789bp)
protein (263aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Leucyl/phenylalanyl-tRNA--protein transferase id=1724512 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
aat; leucyl/phenylalanyl-tRNA--protein transferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

838..2010
-----------------
DNA (1173bp)
protein (391aa)
transporter n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036FBB02
putative multidrug resistance protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
putative transmembrane transport protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2073..3662
-----------------
DNA (1590bp)
protein (530aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
dihydroorotase (EC:3.5.2.3)
D-aminoacylase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5S9C8_9BACT
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3805..5088
-----------------
DNA (1284bp)
protein (428aa)
putative aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
4-aminobutyrate aminotransferase family protein id=2089517 bin=GWD2_Deltaproteobacteria_55_8 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative aminotransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5222..6214
-----------------
DNA (993bp)
protein (331aa)
dipeptide transport system permease protein dppB id=2089518 bin=GWD2_Deltaproteobacteria_55_8 species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
putative dipeptide transport system permease protein DppB-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6214..7053
-----------------
DNA (840bp)
protein (280aa)
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
oligopeptide permease OppC id=2089520 bin=GWD2_Deltaproteobacteria_55_8 species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
oligopeptide permease OppC
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7071..8606
-----------------
DNA (1536bp)
protein (512aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Extracellular solute-binding protein family 5 id=2089521 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 5 extracellular solute-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8640..8912
-----------------
DNA (273bp)
protein (91aa)
Putative uncharacterized protein id=2089522 bin=GWD2_Deltaproteobacteria_55_8 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Translation elongation factor-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8900..9274)
-----------------
DNA (375bp)
protein (125aa)
Putative peptide chain release factor 1 id=2089523 bin=GWD2_Deltaproteobacteria_55_8 species=Waddlia chondrophila genus=Waddlia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
prfA3; peptide chain release factor 1 Tax=GWD2_Deltaproteobacteria_55_8_curated
prfA3; peptide chain release factor 1
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9430..9564
-----------------
DNA (135bp)
protein (45aa)
putative branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9574..10197
-----------------
DNA (624bp)
protein (208aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MN72_BDEBA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10194..11033
-----------------
DNA (840bp)
protein (280aa)
putative 2,5-diketo-D-gluconic acid reductase (EC:1.1.1.274) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
putative 2,5-diketo-D-gluconic acid reductase (EC:1.1.1.274)
Putative 2,5-diketo-D-gluconic acid reductase id=2089524 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11295..11408
-----------------
DNA (114bp)
protein (38aa)
Uncharacterized protein id=2089525 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Uncharacterized protein Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11808..12140
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MSX0_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Hypothetical Protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1558_15
unknown

Not on your lists

12144..12239
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

Displaying 15 items

View Taxonomy