ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1714)
DNA (1713bp) protein (571aa)
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial Tax=GWD2_Deltaproteobacteria_55_8_curated
ABC transporter, ATP-binding/membrane protein id=1742845 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter ATP-binding protein/permease
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1811..2140)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H7C0_9FIRM
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2177..2434)
DNA (258bp) protein (86aa)
Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_4
unknown

Not on your lists

comp(2492..2692)
DNA (201bp) protein (67aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3206..3631
DNA (426bp) protein (142aa)
GTP-binding protein TypA/BipA id=1742815 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GTP-binding protein TypA/BipA; K06207 GTP-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
typA; GTP-binding protein TypA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3646..3894)
DNA (249bp) protein (83aa)
glutaredoxin Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
glutaredoxin id=14626034 bin=bin7_NC10_sister species=Halococcus hamelinensis genus=Halococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
trxA8; thioredoxin
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3891..6980)
DNA (3090bp) protein (1030aa)
Uncharacterized protein id=1900734 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
AsmA family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7134..7331
DNA (198bp) protein (66aa)
Uncharacterized protein id=1900737 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Uncharacterized protein Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7371..8012
DNA (642bp) protein (214aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17); K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17] Tax=GWD2_Deltaproteobacteria_55_8_curated
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Phosphatidylethanolamine N-methyltransferase id=1900739 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8009..8629)
DNA (621bp) protein (207aa)
Uncharacterized protein id=1900756 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8657..9898)
DNA (1242bp) protein (414aa)
Mce family protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Mce family protein id=1900758 bin=GWD2_Deltaproteobacteria_55_8 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Mce family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9852..10589)
DNA (738bp) protein (246aa)
ABC transporter ATP-binding protein (EC:3.6.3.-) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter (ATP-binding protein) id=1900760 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10586..11371)
DNA (786bp) protein (262aa)
Toluene transporter subunit: membrane component of ABC superfamily id=1900761 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
yrbE; toluene ABC transporter subunit membrane protein Tax=GWD2_Deltaproteobacteria_55_8_curated
yrbE; toluene ABC transporter subunit membrane protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11390..11596)
DNA (207bp) protein (69aa)
Sec-independent protein translocase protein TatA id=1900763 bin=GWD2_Deltaproteobacteria_55_8 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Sec-independent protein translocase protein TatA/E-like protein; K03116 sec-independent protein translocase protein TatA Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
preprotein translocase subunit TatA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11606..13063)
DNA (1458bp) protein (486aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Serine protease do-like (EC:3.4.21.-)
Putative Serine protease do-like id=1900765 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13244..14506
DNA (1263bp) protein (421aa)
MgtE integral membrane protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
MgtE intracellular region id=1900767 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MgtE integral membrane protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_335_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14508..15380
DNA (873bp) protein (291aa)
Natural resistance-associated macrophage protein id=1900769 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
natural resistance-associated macrophage protein Tax=GWD2_Deltaproteobacteria_55_8_curated
natural resistance-associated macrophage protein
Displaying 17 items

View Taxonomy