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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1330
DNA (1329bp) protein (443aa)
Sigma-54 dependent response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Y0_9BACT
sigma-54 dependent response regulator Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
sigma-54 dependent response regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1558..1947
DNA (390bp) protein (130aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1881849 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Fis family transcriptional regulator; K10943 two component system, response regulator FlrC Tax=GWD2_Deltaproteobacteria_55_8_curated
Fis family transcriptional regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1961..2188
DNA (228bp) protein (76aa)
id=1881848 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1881848 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2366..2935
DNA (570bp) protein (190aa)
Peptidoglycan-associated lipoprotein id=1881845 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein Tax=GWD2_Deltaproteobacteria_55_8_curated
peptidoglycan-associated lipoprotein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2955..3308
DNA (354bp) protein (118aa)
Pentapeptide repeat protein id=1881844 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pentapeptide repeat-containing protein Tax=GWD2_Deltaproteobacteria_55_8_curated
pentapeptide repeat-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3588..4247
DNA (660bp) protein (220aa)
Putative cytochrome c oxidase, subunit II id=1881842 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome c oxidase, subunit II Tax=GWD2_Deltaproteobacteria_55_8_curated
cytochrome c oxidase, subunit II
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4326..6083
DNA (1758bp) protein (586aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase subunit I id=1881839 bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6091..7026
DNA (936bp) protein (312aa)
Cytochrome oxidase assembly Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative Cytochrome oxidase assembly id=1881837 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Cytochrome oxidase assembly
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7023..7928
DNA (906bp) protein (302aa)
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) Tax=GWD2_Deltaproteobacteria_55_8_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase id=1881836 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8114..8779
DNA (666bp) protein (222aa)
cytochrome c oxidase subunit III; K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
cytochrome C oxidase subunit III id=1881835 bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome c oxidase subunit III
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8835..9128
DNA (294bp) protein (98aa)
id=1881834 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1881834 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9125..9742
DNA (618bp) protein (206aa)
cytochrome C oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=GWD2_Deltaproteobacteria_55_8_curated
Cytochrome c oxidase subunit III id=1881833 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome C oxidase subunit III
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9764..10036
DNA (273bp) protein (91aa)
Caa(3)-type oxidase, subunit IV id=1881831 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
caa(3)-type oxidase subunit IV Tax=GWD2_Deltaproteobacteria_55_8_curated
caa(3)-type oxidase subunit IV
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10033..10446
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=1881829 bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_531_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11559..12548
DNA (990bp) protein (330aa)
Uncharacterized protein id=2084994 bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
Displaying 15 items

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