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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..945
DNA (945bp) protein (315aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
tRNA dimethylallyltransferase id=1782154 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1028..1231
DNA (204bp) protein (68aa)
id=1782157 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1782157 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1313..1516
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQR2_OPITP
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1570..1968
DNA (399bp) protein (133aa)
Pyrimidine utilization protein C id=1782158 bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces sp. C genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
endoribonuclease L-PSP Tax=GWD2_Deltaproteobacteria_55_8_curated
endoribonuclease L-PSP
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2015..3268)
DNA (1254bp) protein (418aa)
cobalamin synthesis protein P47K Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Cobalamin synthesis protein P47K id=1782161 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cobalamin synthesis protein P47K
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3342..3851)
DNA (510bp) protein (170aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=1782162 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4377..5378)
DNA (1002bp) protein (334aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2113540 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5481..7730)
DNA (2250bp) protein (750aa)
ndhL; nicotinate dehydrogenase large molybdopterin subunit (EC:1.17.1.5)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Xanthine dehydrogenase id=2113547 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7734..8216)
DNA (483bp) protein (161aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
HcrC: 4-hydroxybenzoyl-CoA reductase, gamma subunit id=2113550 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8230..9048)
DNA (819bp) protein (273aa)
FAD binding domain in molybdopterin dehydrogenase id=2113554 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aldehyde oxidase and xanthine dehydrogenase, middle chain Tax=GWD2_Deltaproteobacteria_55_8_curated
carbon monoxide dehydrogenase medium chain
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_11
unknown

Not on your lists

9104..9232
DNA (129bp) protein (43aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9339..9494
DNA (156bp) protein (52aa)
Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9513..9833
DNA (321bp) protein (107aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein id=14626602 bin=bin7_NC10_sister species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9910..11040
DNA (1131bp) protein (377aa)
ABC transporter ATP-binding protein id=2113557 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
spermidine/putrescine ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11166..12761
DNA (1596bp) protein (532aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Iron complex ABC transporter permease id=2113559 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured archaeon W5-61a genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
binding-protein-dependent transport systems inner membrane component
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12850..13911
DNA (1062bp) protein (354aa)
Iron complex ABC transporter substrate-binding protein id=1951580 bin=GWD2_Deltaproteobacteria_55_8 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
extracellular solute-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_995_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13991..14710
DNA (720bp) protein (240aa)
Isochorismatase hydrolase id=1951581 bin=GWD2_Deltaproteobacteria_55_8 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
isochorismatase hydrolase Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
Displaying 17 items

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