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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(189..632)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 id=2080642 bin=GWD2_Deltaproteobacteria_55_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=GWD2_Deltaproteobacteria_55_8_curated
rplI; 50S ribosomal protein L9
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(725..1678)
DNA (954bp) protein (318aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Membrane protein DUF2232, putative id=2080644 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1705..1971)
DNA (267bp) protein (89aa)
30S ribosomal protein S18 id=2080646 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
rpsR; 30S ribosomal protein S18
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2021..2389)
DNA (369bp) protein (123aa)
Single-stranded DNA-binding protein id=2080648 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ssb; single-stranded DNA-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2420..2800)
DNA (381bp) protein (127aa)
30S ribosomal protein S6 id=2080650 bin=GWD2_Deltaproteobacteria_55_8 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=GWD2_Deltaproteobacteria_55_8_curated
30S ribosomal protein S6
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2897..4363)
DNA (1467bp) protein (489aa)
Citrate transporter id=2080652 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
citrate transporter Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
citrate transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4377..4940)
DNA (564bp) protein (188aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=2080654 bin=GWD2_Deltaproteobacteria_55_8 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4977..5645)
DNA (669bp) protein (223aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
50S ribosomal protein L25 id=1969371 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5688..6641)
DNA (954bp) protein (318aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=GWD2_Deltaproteobacteria_55_8_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=1969369 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_trna_2
unknown

Not on your lists

comp(6737..6807)
DNA (71bp)
transferRNA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6859..7146)
DNA (288bp) protein (96aa)
Putative septation protein SpoVG id=1969367 bin=GWD2_Deltaproteobacteria_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
spoVG; regulatory protein SpoVG; K06412 stage V sporulation protein G Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
spoVG; regulatory protein SpoVG
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7206..8063)
DNA (858bp) protein (286aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase id=1969365 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_trna_1
unknown

Not on your lists

8177..8248
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8305..8928)
DNA (624bp) protein (208aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative uncharacterized protein id=3318840 bin=GWF2_Ignavibacteria_35_20 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8925..9668)
DNA (744bp) protein (248aa)
putative lipoprotein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
putative lipoprotein id=14626557 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative lipoprotein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9760..11157)
DNA (1398bp) protein (466aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein id=14429980 bin=bin3_NC10 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11245..11517)
DNA (273bp) protein (91aa)
hypothetical protein id=14626253 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11561..12151)
DNA (591bp) protein (197aa)
YeeE/YedE family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7P8_9DELT
rhodanese domain-containing protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
YeeE/YedE family protein (DUF395)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_18
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12148..12678)
DNA (531bp) protein (177aa)
hypothetical protein; K07112 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative transporter component id=3430025 bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
protein of unknown function DUF395 YeeE/YedE
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12726..13133)
DNA (408bp) protein (136aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13155..13637)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00037FE721
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13657..14151)
DNA (495bp) protein (165aa)
OsmC family protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPY5_EMTOG
OsmC family protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
OsmC family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1197_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14170..14688)
DNA (519bp) protein (173aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
CBS domain containing membrane protein id=2148281 bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Displaying 24 items

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