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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1265)
DNA (1263bp) protein (421aa)
cofH1; FO synthase subunit 2 (EC:2.5.1.-) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
cofH1; FO synthase subunit 2 (EC:2.5.1.-)
FO synthase subunit 2 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHB0_9CHLR
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1324..1857)
DNA (534bp) protein (178aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88)
Peptide deformylase id=2101197 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2445..2753
DNA (309bp) protein (103aa)
Ferredoxin id=2101200 bin=GWD2_Deltaproteobacteria_55_8 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dioxygenase, ferredoxin subunit Tax=GWD2_Deltaproteobacteria_55_8_curated
dioxygenase, ferredoxin subunit
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2869..3339
DNA (471bp) protein (157aa)
BadM/Rrf2 family transcriptional regulator Tax=GWD2_Deltaproteobacteria_55_8_curated
Transcriptional regulator, BadM/Rrf2 family id=2101202 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
BadM/Rrf2 family transcriptional regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3366..4136
DNA (771bp) protein (257aa)
FeS assembly ATPase SufC n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUH1_9BACT
sufC; SufC, related to ABC transporter associated with Fe-S cluster assembly (ATP-binding protein) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
sufC; SufC, related to ABC transporter associated with Fe-S cluster assembly (ATP-binding protein)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4141..5478
DNA (1338bp) protein (446aa)
sufD; sufD, needed for fhuF Fe-S center production/stability Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
SufD, needed for fhuF Fe-S center production/stability id=2101211 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sufD; sufD, needed for fhuF Fe-S center production/stability
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5493..6764
DNA (1272bp) protein (424aa)
sufS; cysteine desulfurase (EC:2.8.1.7) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
sufS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=2101213 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6764..7216
DNA (453bp) protein (151aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Iron sulfur cluster assembly protein SufU id=2101215 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7267..7824
DNA (558bp) protein (186aa)
FeS assembly SUF system protein SufT id=2101217 bin=GWD2_Deltaproteobacteria_55_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FeS assembly SUF system protein SufT Tax=GWD2_Deltaproteobacteria_55_8_curated
FeS assembly SUF system protein SufT
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7851..8171
DNA (321bp) protein (107aa)
Uncharacterized protein id=2101219 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8357..8848
DNA (492bp) protein (164aa)
NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=uncultured bacterium RepID=K1Z5T7_9BACT
NADH dehydrogenase subunit B
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8895..9164
DNA (270bp) protein (90aa)
ferredoxin n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B6FF3F
4Fe-4S ferredoxin Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
4Fe-4S ferredoxin
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1755_13
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9628..9882
DNA (255bp) protein (85aa)
glutamine amidotransferase class-I id=15193122 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
glutamine amidotransferase class-I Tax=GWC2_Deltaproteobacteria_55_46b_curated
glutamine amidotransferase class-I
Displaying 13 items

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