ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

303..614
DNA (312bp) protein (104aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=uncultured bacterium RepID=K2BW97_9BACT
putative antibiotic biosynthesis monooxygenase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
putative antibiotic biosynthesis monooxygenase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

651..977
DNA (327bp) protein (109aa)
glutathione S-transferase P subunit (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
glutathione S-transferase P subunit (EC:2.5.1.18)
Putative glutathione S-transferase P subunit n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P641_AROAE
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_3
unknown

Not on your lists

comp(958..1305)
DNA (348bp) protein (116aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1433..2701
DNA (1269bp) protein (423aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative sugar (And other) transporter id=2045762 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_005H07 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MFS transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2702..3289)
DNA (588bp) protein (196aa)
type 12 methyltransferase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
SAM-dependent methyltransferase id=1913812 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
type 12 methyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..4129)
DNA (744bp) protein (248aa)
Amidophosphoribosyltransferase-like protein id=1913816 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidophosphoribosyltransferase-like protein Tax=GWD2_Deltaproteobacteria_55_8_curated
amidophosphoribosyltransferase-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4187..5728)
DNA (1542bp) protein (514aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=GWD2_Deltaproteobacteria_55_8_curated
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=1913819 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gpmI; phosphoglyceromutase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..6123)
DNA (318bp) protein (106aa)
iojap superfamily protein; K09710 ribosome-associated protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Iojap protein family id=1913844 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iojap superfamily protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6216..6878)
DNA (663bp) protein (221aa)
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Probable nicotinate-nucleotide adenylyltransferase id=1913845 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nadD; nicotinate/nicotinamide mononucleotide adenylyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6875..8131)
DNA (1257bp) protein (419aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=GWD2_Deltaproteobacteria_55_8_curated
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase id=1913846 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8223..9359)
DNA (1137bp) protein (379aa)
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase id=1913849 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9340..10380)
DNA (1041bp) protein (347aa)
GTPase obg id=1913852 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GTPase obg; K03979 GTP-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
GTPase obg
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10570..10824)
DNA (255bp) protein (85aa)
50S ribosomal protein L27 id=1913854 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
LSU ribosomal protein L27P Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
LSU ribosomal protein L27P
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10841..11152)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 id=1913856 bin=GWD2_Deltaproteobacteria_55_8 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
rplU; 50S ribosomal protein L21
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11831..12502
DNA (672bp) protein (224aa)
Putative uncharacterized protein id=1913858 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein; K03744 LemA protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12593..12988)
DNA (396bp) protein (132aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_17
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13339..13971
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74D40_GEOSL
hypothetical protein; K08988 putative membrane protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_18
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13981..15012)
DNA (1032bp) protein (344aa)
ABC transporter substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative transporter id=1748513 bin=GWD2_Deltaproteobacteria_55_8 species=Maritimibacter alkaliphilus genus=Maritimibacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15202..16197
DNA (996bp) protein (332aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11); K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase id=4347736 bin=GWC2_Methylomirabilis_70_16 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
5,10-methylene tetrahydromethanopterin reductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16444..16650
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZAP0_9BACT
Uncharacterized protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_299_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16647..17027
DNA (381bp) protein (127aa)
Ribonuclease VapC n=1 Tax=uncultured bacterium RepID=K1ZTC9_9BACT
twitching motility protein PilT; K07062 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
twitching motility protein PilT
Displaying 21 items

View Taxonomy