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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..338
DNA (336bp) protein (112aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=GWD2_Deltaproteobacteria_55_8_curated
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Holliday junction endonuclease RuvC id=1901865 bin=GWD2_Deltaproteobacteria_55_8 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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432..1016
DNA (585bp) protein (195aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=GWD2_Deltaproteobacteria_55_8_curated
Holliday junction ATP-dependent DNA helicase RuvA id=1901867 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ATP-dependent DNA helicase RuvA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1096..2133
DNA (1038bp) protein (346aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Holliday junction ATP-dependent DNA helicase RuvB id=1901869 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ruvB; Holliday junction DNA helicase RuvB
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2229..4460
DNA (2232bp) protein (744aa)
multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_
Multi-sensor signal transduction histidine kinase id=1901873 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
histidine kinase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4482..5777
DNA (1296bp) protein (432aa)
lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
UDP-3-O-acyl-N-acetylglucosamine deacetylase id=1901874 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5804..6253
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=1901875 bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2055_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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6630..7970
DNA (1341bp) protein (447aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein id=14428959 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Displaying 7 items

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