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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..530)
DNA (528bp) protein (176aa)
Amidohydrolase family protein id=1975032 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative amidohydrolase Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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888..1547
DNA (660bp) protein (220aa)
Putative uncharacterized protein id=1975033 bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
glutaredoxin family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1558..2328)
DNA (771bp) protein (257aa)
UPI0002776946 related cluster id=1975034 bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
fabG; 3-oxoacyl-ACP reductase Tax=GWD2_Deltaproteobacteria_55_8_curated
fabG; 3-oxoacyl-ACP reductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2347..3318)
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
NAD-dependent epimerase/dehydratase id=1975035 bin=GWD2_Deltaproteobacteria_55_8 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3411..3509)
DNA (99bp) protein (33aa)
Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3513..5066)
DNA (1554bp) protein (518aa)
SNF family Na+-dependent transporter Tax=GWD2_Deltaproteobacteria_55_8_curated
Transporter id=1975036 bin=GWD2_Deltaproteobacteria_55_8 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
SNF family Na+-dependent transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5086..6063)
DNA (978bp) protein (326aa)
AsmA family protein id=1975058 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
AsmA family protein; K07289 AsmA protein Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6528..6692
DNA (165bp) protein (55aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6718..7686
DNA (969bp) protein (323aa)
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=14430995 bin=bin3_NC10 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
branched-chain amino acid ABC transporter permease
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7707..8969
DNA (1263bp) protein (421aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14430994 bin=bin3_NC10 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8956..9735
DNA (780bp) protein (260aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14430993 bin=bin3_NC10 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9728..10429
DNA (702bp) protein (234aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC transporter, ATP-binding protein id=4383456 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2339_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10611..11309
DNA (699bp) protein (233aa)
RNA-binding protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000363B9F4
tex; putative transcriptional accessory protein; K06959 uncharacterized protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
tex; transcriptional accessory protein Tex
Displaying 13 items

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