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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

326..793
DNA (468bp) protein (156aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=3580204 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_2
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

982..1599
DNA (618bp) protein (206aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_16_Gamma2_60_9_curated
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9Z7_GEOBB
msrA; peptide methionine sulfoxide reductase (S-isomer-specific)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_3
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1704..2885)
DNA (1182bp) protein (394aa)
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5'-deoxyadenosine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=5'-dA deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.41 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=868131 species="Archaea;
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7Q3_METSW
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3162..4553
DNA (1392bp) protein (464aa)
FAD linked oxidase; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] Tax=GWD2_Deltaproteobacteria_55_8_curated
Putative FAD binding domain protein id=2130674 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FAD linked oxidase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4593..5534)
DNA (942bp) protein (314aa)
NMT1/THI5 like family protein 6 id=2130672 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like family protein 6 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
NMT1-like family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5641..6825
DNA (1185bp) protein (395aa)
Peptidase M48, Ste24p id=2130670 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M48, Ste24p Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
peptidase M48, Ste24p
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6852..7847
DNA (996bp) protein (332aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2130668 bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter periplasmic substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
NMT1/THI5 like domain protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8120..8848
DNA (729bp) protein (243aa)
Putative uncharacterized protein id=2130666 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein; K07164 Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8884..9303
DNA (420bp) protein (140aa)
ribonuclease H; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=GWD2_Deltaproteobacteria_55_8_curated
Ribonuclease H id=2130664 bin=GWD2_Deltaproteobacteria_55_8 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribonuclease H
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10095..10547
DNA (453bp) protein (151aa)
Protein MraZ id=2130662 bin=GWD2_Deltaproteobacteria_55_8 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cell division protein MraZ Tax=GWD2_Deltaproteobacteria_55_8_curated
cell division protein MraZ
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10608..10970
DNA (363bp) protein (121aa)
Stage II sporulation protein id=2130661 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
anti-anti-sigma factor Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
anti-anti-sigma factor
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10970..11899
DNA (930bp) protein (310aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H id=2130659 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11911..12258
DNA (348bp) protein (116aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Cell division protein FtsL id=2130657 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12255..14210
DNA (1956bp) protein (652aa)
ftsI; bifunctional peptidoglycan transglycosylase/transpeptidase FtsI; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWD2_Deltaproteobacteria_55_8_curated
Peptidoglycan transglycosylase and transpeptidase FtsI id=2130655 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ftsI; bifunctional peptidoglycan transglycosylase/transpeptidase FtsI
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14216..15769
DNA (1554bp) protein (518aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=GWD2_Deltaproteob
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase id=2130653 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15837..17237
DNA (1401bp) protein (467aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=GWD2_Deltaproteobacteria_55_8_cu
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=2130650 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17241..18317
DNA (1077bp) protein (359aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=GWD2_Deltaproteobacteria_55_8_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=2130614 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18406..19740
DNA (1335bp) protein (445aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=GWD2_Deltaproteobacteria_55_8_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=2130611 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UDP-N-acetylmuramoylalanine--D-glutamate ligase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19737..20831
DNA (1095bp) protein (365aa)
Cell division protein FtsW id=2130606 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cell cycle protein, ftsw/roda/spove family; K03588 cell division protein FtsW Tax=GWD2_Deltaproteobacteria_55_8_curated
stage V sporulation protein E
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20834..21910
DNA (1077bp) protein (359aa)
murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylgluco
murG; UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=2130602 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_21
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21986..23374
DNA (1389bp) protein (463aa)
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
UDP-N-acetylmuramate--L-alanine ligase id=4938250 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
murC; UDP-N-acetylmuramate--L-alanine ligase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23505..24446
DNA (942bp) protein (314aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3N3_9FIRM
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_23
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24452..25276
DNA (825bp) protein (275aa)
cell division septal protein FtsQ; K03589 cell division protein FtsQ Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Cell division protein FtsQ id=2862688 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ftsQ; cell division protein FtsQ
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_24
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25309..26562
DNA (1254bp) protein (418aa)
ftsA; cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Cell division protein ftsA id=2862693 bin=GWC2_Pelobacter_58_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ftsA; cell division protein FtsA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_25
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26595..27791
DNA (1197bp) protein (399aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Cell division protein FtsZ id=4938245 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cell division protein FtsZ
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_26
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28078..28212)
DNA (135bp) protein (45aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_27
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28449..29534)
DNA (1086bp) protein (362aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NMD7_9FIRM
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_287_28
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29651..29761)
DNA (111bp) protein (37aa)
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein id=1996524 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 28 items

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