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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..461)
DNA (459bp) protein (153aa)
DNA mismatch repair protein MutL id=1782151 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=GWD2_Deltaproteobacteria_55_8_curated
DNA mismatch repair protein MutL
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

699..1490
DNA (792bp) protein (264aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Uncharacterized protein id=1782148 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1504..2943)
DNA (1440bp) protein (480aa)
ubiD_R; UbiD-like subunit of potential (de) carboxylase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
UbiD-like subunit of potential (De) carboxylase id=2137912 bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3021..4343)
DNA (1323bp) protein (441aa)
Putative transporter protein id=1867805 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4409..4882
DNA (474bp) protein (158aa)
bifunctional protein HldE (EC:2.7.1.- 2.7.7.-) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (EC:2.7.1.- 2.7.7.-)
Bifunctional protein HldE id=1867808 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4885..5076
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFI0_DESAR
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=GWD2_Deltaproteobacteria_55_8_curated
50S ribosomal protein L28
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5158..7320)
DNA (2163bp) protein (721aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA id=1867812 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7327..7974)
DNA (648bp) protein (216aa)
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8] Tax=GWD2_Deltaproteobacteria_55_8_curated
Guanylate kinase id=1867816 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gmk; guanylate kinase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7971..8834)
DNA (864bp) protein (288aa)
YicC-like domain-containing protein id=1867820 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
YicC-like domain-containing protein Tax=GWD2_Deltaproteobacteria_55_8_curated
YicC-like domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8831..9826)
DNA (996bp) protein (332aa)
PfkB domain protein id=1867824 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribokinase-like domain-containing protein Tax=GWD2_Deltaproteobacteria_55_8_curated
ribokinase-like domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9816..10961)
DNA (1146bp) protein (382aa)
Glycosyl transferase group 1 id=1867828 bin=GWD2_Deltaproteobacteria_55_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyl transferase group 1 family protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
glycosyl transferase family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10954..11805)
DNA (852bp) protein (284aa)
Glycosyltransferase id=1867832 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyl transferase family protein Tax=GWD2_Deltaproteobacteria_55_8_curated
glycosyl transferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12116..13816)
DNA (1701bp) protein (567aa)
Glycosyl transferase family 39 id=1867836 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyl transferase family protein Tax=GWD2_Deltaproteobacteria_55_8_curated
arnT; undecaprenyl-diphospho-4-amino-4-deoxy-L-arabinose--lipid A 4-amino-4-deoxy-L-arabinose transferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14005..14946)
DNA (942bp) protein (314aa)
Glycosyl transferase family 2 id=1867840 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 2 glycosyl transferase Tax=GWD2_Deltaproteobacteria_55_8_curated
family 2 glycosyl transferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_604_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14931..15257)
DNA (327bp) protein (109aa)
Glycosyl transferase family 2 id=1867844 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 15 items

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