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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..995
DNA (993bp) protein (331aa)
Iron-binding periplasmic protein id=1927455 bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
putative ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(998..1318)
DNA (321bp) protein (107aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=GWD2_Deltaproteobacteria_55_8_curated
Strongly similar to methionyl-tRNA synthetase (Mets) id=1927457 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
methionyl-tRNA synthetase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1444..1587
DNA (144bp) protein (48aa)
Alkyl hydroperoxide reductase id=1927504 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
peroxiredoxin
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1618..2028
DNA (411bp) protein (137aa)
thioredoxin peroxidase id=1927505 bin=GWD2_Deltaproteobacteria_55_8 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tpx1; thioredoxin peroxidase Tpx1 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
alkyl hydroperoxide reductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2075..3466)
DNA (1392bp) protein (464aa)
2-methylcitrate dehydratase (EC:4.2.1.79); K01720 2-methylcitrate dehydratase [EC:4.2.1.79] Tax=GWD2_Deltaproteobacteria_55_8_curated
2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase id=1927506 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3595..4695
DNA (1101bp) protein (367aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SKQ0_9ZZZZ
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4830..6764
DNA (1935bp) protein (645aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein id=14632985 bin=bin9_gal15 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6795..8189
DNA (1395bp) protein (465aa)
hypothetical protein; K13796 tricarballylate dehydrogenase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein; K13796 tricarballylate dehydrogenase id=14626114 bin=bin7_NC10_sister species=Lutibaculum baratangense genus=Lutibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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8176..9282
DNA (1107bp) protein (369aa)
CitB domain-containing protein; K13795 citrate/tricarballylate utilization protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Citrate utilization protein B id=3085410 bin=GWC2_Methylomirabilis_70_16 species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
citrate utilization protein B
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9388..9975
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B77285
AMMECR1 domain-containing protein; K09141 hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
AMMECR1 domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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10105..10470
DNA (366bp) protein (122aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXQ4_DESAC
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
TraR/DksA family transcriptional regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10486..11355
DNA (870bp) protein (290aa)
gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB (EC:2.7.7.9) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI00036B84AD
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_trna_1
unknown

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11361..11433
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11547..12746
DNA (1200bp) protein (400aa)
Uncharacterized protein id=1939871 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1511_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12790..13395)
DNA (606bp) protein (202aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Uncharacterized protein id=1939873 bin=GWD2_Deltaproteobacteria_55_8 species=Trichomonas vaginalis genus=Trichomonas taxon_order=Trichomonadida taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Displaying 15 items

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