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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_1
unknown

Not on your lists

3..92
DNA (90bp) protein (30aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

346..1347
DNA (1002bp) protein (334aa)
Putative uncharacterized protein id=1946153 bin=GWD2_Deltaproteobacteria_55_8 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1508..1825
DNA (318bp) protein (106aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative uncharacterized protein id=1946154 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1807..2013
DNA (207bp) protein (69aa)
Putative uncharacterized protein id=1946155 bin=GWD2_Deltaproteobacteria_55_8 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2111..3367
DNA (1257bp) protein (419aa)
UvrD/REP helicase id=1946156 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DNA and RNA helicase Tax=GWD2_Deltaproteobacteria_55_8_curated
DNA and RNA helicase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3448..4269
DNA (822bp) protein (274aa)
Putative uncharacterized protein id=1803246 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4266..5207
DNA (942bp) protein (314aa)
Peptidase M50 id=1803244 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M50 Tax=GWD2_Deltaproteobacteria_55_8_curated
peptidase M50
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5192..5647
DNA (456bp) protein (152aa)
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
CMP/dCMP deaminase, zinc-binding protein id=1803242 bin=GWD2_Deltaproteobacteria_55_8 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
zinc-binding CMP/dCMP deaminase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5705..6028)
DNA (324bp) protein (108aa)
atpC2; H(+)-transporting two-sector ATPase (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=GWD2_Deltaproteobacteria_55_8_curated
atpC2; H(+)-transporting two-sector ATPase (EC:3.6.3.14)
ATP synthase subunit c id=1803240 bin=GWD2_Deltaproteobacteria_55_8 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6098..6793)
DNA (696bp) protein (232aa)
ATP synthase subunit a id=1803238 bin=GWD2_Deltaproteobacteria_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
atpB; ATP synthase F0 subunit A Tax=GWD2_Deltaproteobacteria_55_8_curated
ATP synthase F0, A subunit
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6794..7174)
DNA (381bp) protein (127aa)
id=1803237 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1803237 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7171..7422)
DNA (252bp) protein (84aa)
Uncharacterized protein id=1803235 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Uncharacterized protein Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7645..8946)
DNA (1302bp) protein (434aa)
Glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase id=1803233 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9371..10696
DNA (1326bp) protein (442aa)
Chromosomal replication initiator protein DnaA id=1803230 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein Tax=GWD2_Deltaproteobacteria_55_8_curated
dnaA; chromosomal replication initiation protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10924..12030
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWD2_Deltaproteobacteria_55_8_curated
DNA polymerase III subunit beta id=1803228 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dnaN; DNA polymerase III subunit beta
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12059..12955)
DNA (897bp) protein (299aa)
Permease of the drug/metabolite transporter superfamily id=1803226 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
drug/metabolite transporter superfamily permease Tax=GWD2_Deltaproteobacteria_55_8_curated
drug/metabolite transporter superfamily permease
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13055..13690
DNA (636bp) protein (212aa)
Putative uncharacterized protein id=1803224 bin=GWD2_Deltaproteobacteria_55_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13705..14076)
DNA (372bp) protein (124aa)
id=1803223 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1803223 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_19
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14222..15181)
DNA (960bp) protein (320aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
4,5-dihydroxyphthalate decarboxylase id=1803221 bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15304..16287
DNA (984bp) protein (328aa)
Putative uncharacterized protein id=1803219 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16338..17039)
DNA (702bp) protein (234aa)
class II aldolase/adducin family protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase id=2036013 bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
class II aldolase/adducin family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_22
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17036..18592)
DNA (1557bp) protein (519aa)
Putative benzoate-CoA ligase BzlA (Fragment) id=2036011 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridia bacterium enrichment culture clone BF genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
benzoate-CoA ligase family Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
benzoate-CoA ligase family
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_23
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18679..20151)
DNA (1473bp) protein (491aa)
succinate-semialdehyde dehydrogenase (NAD(P)+); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Succinate-semialdehyde dehydrogenase (NAD(P)+) id=2036009 bin=GWD2_Deltaproteobacteria_55_8 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NAD-dependent aldehyde dehydrogenase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20212..20490
DNA (279bp) protein (93aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
AMP-dependent synthetase and ligase id=4392090 bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AMP-dependent synthetase and ligase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_25
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20873..21298
DNA (426bp) protein (142aa)
PIN domain-containing protein Tax=GWD2_Deltaproteobacteria_55_8_curated
PilT protein domain protein id=4819256 bin=GWC2_Methylomirabilis_70_16 species=Anabaena sp. 90 genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PIN domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_205_26
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21330..22091)
DNA (762bp) protein (254aa)
id=2036006 Tax=GWD2_Deltaproteobacteria_55_8_curated
id=2036006 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Displaying 26 items

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