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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1..189
DNA (189bp) protein (63aa)
Type I restriction endonuclease, HsdR family n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AF14_GEOSK
type I site-specific deoxyribonuclease HsdR family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
type I restriction endonuclease, HsdR family
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

709..1281
DNA (573bp) protein (191aa)
hypothetical protein id=14626899 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1518..2594
DNA (1077bp) protein (359aa)
prephenate dehydratase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Chorismate mutase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE06_GEOUR
prephenate dehydratase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2591..3685
DNA (1095bp) protein (365aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase id=4574737 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3707..4720
DNA (1014bp) protein (338aa)
phospho-2-dehydro-3-deoxyheptonate aldolase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase id=1857361 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4729..5583
DNA (855bp) protein (285aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=GWD2_Deltaproteobacteria_55_8_curated
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase id=1857363 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5609..6898
DNA (1290bp) protein (430aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=GWD2_Deltaproteobacteria_55_8_curated
3-phosphoshikimate 1-carboxyvinyltransferase id=1857366 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
3-phosphoshikimate 1-carboxyvinyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6898..7593
DNA (696bp) protein (232aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=GWD2_Deltaproteobacteria_55_8_curated
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase id=1857369 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7612..9366
DNA (1755bp) protein (585aa)
rpsA1; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=GWD2_Deltaproteobacteria_55_8_curated
30S ribosomal protein S1 id=1857372 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsA1; 30S ribosomal protein S1
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9454..10353
DNA (900bp) protein (300aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.26); K04773 protease IV [EC:3.4.21.-] Tax=GWD2_Deltaproteobacteria_55_8_curated
Signal peptide peptidase A, Serine peptidase, MEROPS family S49 id=1857375 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
multidrug transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10438..10728
DNA (291bp) protein (97aa)
Histone family protein DNA-binding protein id=1857378 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
huP-1; DNA-binding protein HU; K05788 integration host factor subunit beta Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ihfB-2; integration host factor subunit beta
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10740..11246
DNA (507bp) protein (169aa)
histidine triad (HIT) protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Histidine triad (HIT) protein id=1857381 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
histidine triad (HIT) protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11239..11553
DNA (315bp) protein (105aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative uncharacterized protein id=1857384 bin=GWD2_Deltaproteobacteria_55_8 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11580..12977
DNA (1398bp) protein (466aa)
Mg-chelatase subunit ChlI-like protein; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Mg-chelatase subunit ChlI-like protein id=1857387 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Mg-chelatase subunit ChlI-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13052..14650
DNA (1599bp) protein (533aa)
von Willebrand factor type A Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
von Willebrand factor type A id=1857390 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
von Willebrand factor type A
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_381_16
unknown

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14689..14757
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 16 items

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