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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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21..434
DNA (414bp) protein (138aa)
id=2009859 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=2009859 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

487..831
DNA (345bp) protein (115aa)
id=2009860 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=2009860 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(916..2304)
DNA (1389bp) protein (463aa)
putative glycerate kinase (GckA); K11529 glycerate 2-kinase [EC:2.7.1.165] Tax=GWD2_Deltaproteobacteria_55_8_curated
glycerate kinase (EC:2.7.1.31)
Putative glycerate kinase (GckA) id=2009862 bin=GWD2_Deltaproteobacteria_55_8 species=Hyperthermus butylicus genus=Hyperthermus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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2337..2867
DNA (531bp) protein (177aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Conserved protein id=2009865 bin=GWD2_Deltaproteobacteria_55_8 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2907..3377)
DNA (471bp) protein (157aa)
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Transcriptional regulator, TraR/DksA family id=2009868 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TraR/DksA family transcriptional regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3370..4725)
DNA (1356bp) protein (452aa)
MiaB-like tRNA modifying enzyme YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=GWD2_Deltaproteobacteria_55_8_curated
Ribosomal protein S12 methylthiotransferase RimO id=2009871 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MiaB-like tRNA modifying enzyme YliG
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4730..5416)
DNA (687bp) protein (229aa)
Outer-membrane lipoprotein carrier protein id=2009874 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Outer-membrane lipoprotein carrier protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Outer-membrane lipoprotein carrier protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5394..7637)
DNA (2244bp) protein (748aa)
FtsK/SpoIIIE domain protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=GWD2_Deltaproteobacteria_55_8_curated
FtsK/SpoIIIE domain protein id=2009876 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FtsK/SpoIIIE domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7650..9305)
DNA (1656bp) protein (552aa)
hypothetical protein; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Beta-lactamase domain protein id=2477318 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
metal-dependent hydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9314..10087)
DNA (774bp) protein (258aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase id=2009884 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
1-acyl-sn-glycerol-3-phosphate acyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10270..10692
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein id=2009886 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ssb; ssDNA-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11482..11886
DNA (405bp) protein (135aa)
Putative uncharacterized protein id=2009889 bin=GWD2_Deltaproteobacteria_55_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EDY17629.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

11966..12178
DNA (213bp) protein (71aa)
Putative uncharacterized protein id=2009890 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12212..13189)
DNA (978bp) protein (326aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=2009891 bin=GWD2_Deltaproteobacteria_55_8 species=Ectothiorhodospira sp. PHS-1 genus=Ectothiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lactate dehydrogenase-like oxidoreductase Tax=GWD2_Deltaproteobacteria_55_8_curated
lactate dehydrogenase-like oxidoreductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13192..13671)
DNA (480bp) protein (160aa)
mazG; nucleoside triphosphate pyrophosphohydrolase; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Nucleoside triphosphate pyrophosphohydrolase MazG id=2009892 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mazG; nucleoside triphosphate pyrophosphohydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13812..14672
DNA (861bp) protein (287aa)
Uncharacterized protein id=2009893 bin=GWD2_Deltaproteobacteria_55_8 species=Alcanivorax pacificus genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14721..15701)
DNA (981bp) protein (327aa)
amino acid ABC transporter; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Uncharacterized protein id=2009894 bin=GWD2_Deltaproteobacteria_55_8 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15843..16565
DNA (723bp) protein (241aa)
dienelactone hydrolase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XAN3_9CHRO
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_19
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16580..17629
DNA (1050bp) protein (350aa)
Putative amidohydrolase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG59_SINAD
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
amidohydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_20
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17673..18689
DNA (1017bp) protein (339aa)
agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWW1_ROSS1
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_21
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18956..19354
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 298 RepID=N9LIH7_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_22
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19532..19744
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_706_23
unknown

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comp(20363..21181)
DNA (819bp) protein (273aa)

This feature has no annotations

Displaying 23 items

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