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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..2756)
DNA (2754bp) protein (918aa)
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
glpC; D-lactate dehydrogenase (cytochrome) id=14627254 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
glpC; D-lactate dehydrogenase (cytochrome)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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2890..4299
DNA (1410bp) protein (470aa)
fumarase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
fumarase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] id=14429912 bin=bin3_NC10 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
fumC; fumarate hydratase, class II (EC:4.2.1.2)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4362..4700
DNA (339bp) protein (113aa)
Ferredoxin family protein id=1869162 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thioredoxin-like [2Fe-2S] ferredoxin family protein Tax=GWD2_Deltaproteobacteria_55_8_curated
ferredoxin
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4778..5542
DNA (765bp) protein (255aa)
Putative integral membrane protein id=1869167 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5542..7344
DNA (1803bp) protein (601aa)
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit id=3859625 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7344..8102
DNA (759bp) protein (253aa)
fumarate reductase iron-sulfur subunit (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=GWA2_Rokubacteria_70_23_curated
Succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase subunit B id=4737577 bin=GWC2_Methylomirabilis_70_24 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8133..8420
DNA (288bp) protein (96aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein id=2167712 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_8
unknown

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8417..8566
DNA (150bp) protein (50aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_4291_9
unknown

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8530..8679
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 9 items

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