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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_9

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(5921..7585)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 554.0
  • Bit_score: 1042
  • Evalue 0.0
RNA polymerase sigma factor id=1921116 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured delta proteobacterium genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 482.0
  • Bit_score: 854
  • Evalue 5.90e-245
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 576.0
  • Bit_score: 380
  • Evalue 7.10e-103

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Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1665
ATGCCAACCGGGGGGGTTGAAATGGATAGTCGTAACATCATTGGAGGGGGCAATCCCTCTCCCGGTCGCAATAACAAGATGAGTCACGATAATCTCAGTGATCGGnnnnnnnTGAGTCACGATAATCTCAGTGATCGGGGAGAACCCAACCTTTTACTGCAGGAGGTGGGGGATCTCTCGGATATCGCATCCCGGGAGCAGACTCATGAAGCCGGCTGGGACCCCGATCAACTGGTCGATCCGGAGAGTCCGGTTGAGGAGATGTCGGATGAGGACGAGGCGGACACTGACTTCGAAAATAAATCCTCAGAGAAGACAAAAAACCCTGTTTTGCTTTATCTCCAGGAGCTGGGATCCATCCCCCTCTTGAGCCGCGAAGAAGAATTAAAACTAGCCCAAAAAATCGCGGAGGGTGAAGCACAAATCAACGCAGAGATCCTGTCTTCGCCTCTCGGGCTCCGTCTCGCGCTTGACCTGGGAAAAAAAGTCGCTGCCGGGCTGGTAAACATACCCGATGTTGTCAATGACCCGGACGAGACCCCGGCGGCCCCCTTGGCGGATGAAACAATCCTCAAAGCCCGTTTCCGGACACAAATGAGAAAGCTCCAGCTTCTCGCCTGGAGTTATGAACGCACGGCCAGGCAACTGGACAAGCGCACGACCGCAGAGCGCCGGAAGCAGCTCGGTAAGAAACTCATCCGCCAGAGGGAGAAAATTGCCGCTGCCATCAAGAGCCTCCAGCTTAACCGCGGGCAAATTGAAATTATTTTTGCAGGTCATAAACGGACCCTTGAGAAGCTCCAAGAGCTGGAACAAAAAATCCAGGGAAGACAAGAAAGGGCGGCGATTCGAACCATCGAGAAAGAGATAGGCATGCCTGCCGAGGAAATTGGGCGAAGGGTCGGGGCCATCCTGGAAAAAAAGGCCCAGGTCGCTTTGACGAAGAATAGCTTTGTCGAGGCTAATCTCCGTCTGGTTGTGGCGATTGCGAAAAAGTACTGCGGCCGGGGTCTCCAGCTTCTCGATCTAATCCAGGAAGGCAACATCGGCCTTATGAGGGCCGTGGAAAAATTCAATTACCACTTCGGTTTTAGGTTTTCGACTTACGCAACCTGGTGGATACGCCAGGCCATCACCCGGGCTCTTTCAGATCACTCTCGCACTATCCGTATCCCGGTCCATATGGTCGACATAGCTAACAAATTTACTCAAACCGTGCGTTACCTCAACCGCCGATTTAACCGGCGCCCTACTCTCGAGGAGATTGCCGCTCAAATGGATATAACGGTAGAAAAGGTGCAGATGATCCTCAACCTGGTAAAAGAACCGCTTTCTCTCGAAATGCCCATAGGCGACGGTGAGGAGGGACGTCTGGAAGACTTAGTCAAGGATGAACACTCTCTTGACCCTGAGAAGGCGGTTATGGACTCTCACTTTCAGGAGGAGACGCGAAGAATCCTTGCGACTCTTACCCCCAGGGAAGAAAAGATCGTCCGCATGCGTTTTGGCATTAGAGAGAAAACGGATTATACGCTAGAGGAAACGGGAAAAATTTTCGGTGTCACGCGTGAAAGAATTCGCCAAATTGAAGCCACGGCCCTAAGAAAGCTCCGCCACCCACGGAGAATGACCGTCCTTAAGGCCATCACGGCAACCGACAGCTAA
PROTEIN sequence
Length: 555
MPTGGVEMDSRNIIGGGNPSPGRNNKMSHDNLSDRXXXSHDNLSDRGEPNLLLQEVGDLSDIASREQTHEAGWDPDQLVDPESPVEEMSDEDEADTDFENKSSEKTKNPVLLYLQELGSIPLLSREEELKLAQKIAEGEAQINAEILSSPLGLRLALDLGKKVAAGLVNIPDVVNDPDETPAAPLADETILKARFRTQMRKLQLLAWSYERTARQLDKRTTAERRKQLGKKLIRQREKIAAAIKSLQLNRGQIEIIFAGHKRTLEKLQELEQKIQGRQERAAIRTIEKEIGMPAEEIGRRVGAILEKKAQVALTKNSFVEANLRLVVAIAKKYCGRGLQLLDLIQEGNIGLMRAVEKFNYHFGFRFSTYATWWIRQAITRALSDHSRTIRIPVHMVDIANKFTQTVRYLNRRFNRRPTLEEIAAQMDITVEKVQMILNLVKEPLSLEMPIGDGEEGRLEDLVKDEHSLDPEKAVMDSHFQEETRRILATLTPREEKIVRMRFGIREKTDYTLEETGKIFGVTRERIRQIEATALRKLRHPRRMTVLKAITATDS*