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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..875
DNA (873bp) protein (291aa)
citrate lyase subunit beta; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Citrate lyase, beta subunit id=1921107 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
citrate lyase subunit beta
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

896..1723
DNA (828bp) protein (276aa)
Predicted beta-lactamase family protein id=1921108 bin=GWD2_Deltaproteobacteria_55_8 species=gamma proteobacterium HdN1 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
beta-lactamase Tax=GWD2_Deltaproteobacteria_55_8_curated
beta-lactamase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1699..3078)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein id=1921109 bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3082..3753)
DNA (672bp) protein (224aa)
Rare lipoprotein A id=1921110 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipoprotein, RlpA family; K03642 rare lipoprotein A Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
lipoprotein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3872..4450)
DNA (579bp) protein (193aa)
hypothetical protein VspiD_21265 id=1921111 bin=GWD2_Deltaproteobacteria_55_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Fatty acid hydroxylase superfamily Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Fatty acid hydroxylase superfamily
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4583..4906)
DNA (324bp) protein (108aa)
RNA-binding protein id=1921112 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative RNA-binding protein RbpA Tax=GWD2_Deltaproteobacteria_55_8_curated
putative RNA-binding protein RbpA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5138..5581)
DNA (444bp) protein (148aa)
id=1921113 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
id=1921113 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5727..5906)
DNA (180bp) protein (60aa)
Putative uncharacterized protein id=1921114 bin=GWD2_Deltaproteobacteria_55_8 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
SRp25 nuclear protein, isoform 3 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
SRp25 nuclear protein, isoform 3
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5921..7585)
DNA (1665bp) protein (555aa)
RNA polymerase sigma70 factor Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RNA polymerase sigma factor id=1921116 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured delta proteobacterium genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RNA polymerase sigma70 factor
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7771..8637
DNA (867bp) protein (289aa)
Transcriptional regulator, XRE family id=1901860 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
XRE family transcriptional regulator Tax=GWD2_Deltaproteobacteria_55_8_curated
XRE family transcriptional regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8698..9012
DNA (315bp) protein (105aa)
id=1901862 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
id=1901862 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9114..9476
DNA (363bp) protein (121aa)
Probable transcriptional regulatory protein NPH_1078 id=1901863 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9559..9909
DNA (351bp) protein (117aa)
Probable transcriptional regulatory protein NPH_1078 id=1901863 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1540_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10014..10115
DNA (102bp) protein (34aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=GWD2_Deltaproteobacteria_55_8_curated
Holliday junction endonuclease RuvC id=1901865 bin=GWD2_Deltaproteobacteria_55_8 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Displaying 14 items

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