ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_108_16

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(15649..16206)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor id=1960424 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 363
  • Evalue 1.80e-97
ribosome recycling factor Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 363
  • Evalue 2.50e-97
ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 229
  • Evalue 6.70e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAACGAGACCTTCTTTATTGATCTCCAGAAAGAAATGGAAAAGTCAGTGGTGGCTTTTCGCAAGGACCTTGCAAAGCTGCGCACGGGAAGGGCCTCGACGGCTTTGTTGGAAGGGGTCATGGTGGATTACTATGGCAGCCCGACCCCCCTCAACCAGTTGGCCACCTTAGGGGCACCGGAGCCCCGCCTCTTAGTGGTGCAACCCTACGACAAGGGAGTCATCGGGGGGATTGAGAAGGCGATCTTCAAGGCGGATCTCGGTTTGACCCCCAACAACGACGGAAAAATCATCCGTATTCCTATACCCGAATTGACAGAGGAGAGACGCAGGGAGCTAGTCAAGCATATCAAAAAGATGGCGGAAGAATTCCGCGTATCCATCCGCAATCACCGCAGGCTCGCTATCGAGAAACTCAAGGAGTTTGCTAAGAAAAAGGAAATTACCGAGGACGATCTCAAGCACAGCCAGGACCGAGTGCAGAAAATCACCGATGATTTCATCAACAGGATCGACAAGGTGCTGAAGACCAAGGAAGACGAAATCATGGAGGTCTGA
PROTEIN sequence
Length: 186
MNETFFIDLQKEMEKSVVAFRKDLAKLRTGRASTALLEGVMVDYYGSPTPLNQLATLGAPEPRLLVVQPYDKGVIGGIEKAIFKADLGLTPNNDGKIIRIPIPELTEERRRELVKHIKKMAEEFRVSIRNHRRLAIEKLKEFAKKKEITEDDLKHSQDRVQKITDDFINRIDKVLKTKEDEIMEV*