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RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(158..373)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKB0_9PLAN
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(574..1629)
DNA (1056bp) protein (352aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QEC8_CALH1
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1678..2100)
DNA (423bp) protein (141aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
protein of unknown function DUF101 id=1242470 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_trna_1
unknown

Not on your lists

comp(2254..2327)
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2386..4560)
DNA (2175bp) protein (725aa)
PAS sensor protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M451_9EURY
PAS/PAC sensor hybrid histidine kinase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PAS/PAC sensor hybrid histidine kinase
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4654..6204
DNA (1551bp) protein (517aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
Uncharacterized protein id=1829481 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6207..6737)
DNA (531bp) protein (177aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRR9_9FIRM
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6747..8195)
DNA (1449bp) protein (483aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
tRNA(Ile)-lysidine synthase n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8DR06_THETY
tRNA(Ile)-lysidine synthetase
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8202..8471)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M0N4_9CYAN
RelE/StbE family addiction module toxin Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RelE/StbE family addiction module toxin
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8461..8658)
DNA (198bp) protein (66aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8713..9135)
DNA (423bp) protein (141aa)
id=4843816 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
id=4843816 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9364..10509)
DNA (1146bp) protein (382aa)
citrate synthase (EC:2.3.3.1) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase id=2432694 bin=GWC2_Deltaproteobacteria_55_46 species=Synechocystis sp. PCC 7509 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10832..10984
DNA (153bp) protein (51aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10998..12407
DNA (1410bp) protein (470aa)
aldehyde dehydrogenase; K00155 [EC:1.2.1.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L7Q4_9BACT
aldehyde dehydrogenase
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(12486..13013)
DNA (528bp) protein (176aa)
Putative HNH endonuclease n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z275_9BACT
HNH endonuclease Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
HNH endonuclease
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

13197..14114
DNA (918bp) protein (306aa)
Peptidase M23 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YLF9_9BACT
peptidase M23 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
peptidase M23
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

14201..14401
DNA (201bp) protein (67aa)
Cold shock DNA/RNA-binding protein n=2 Tax=Geobacter metallireducens RepID=Q39W72_GEOMG
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cold-shock protein
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

14655..17378
DNA (2724bp) protein (908aa)
protein translocase subunit secA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Protein translocase subunit SecA id=4141227 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
protein translocase subunit secA
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(17403..17846)
DNA (444bp) protein (148aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_323_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

18138..18398
DNA (261bp) protein (87aa)
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
DNA repair protein radc id=4892427 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
DNA repair protein RadC
Displaying 20 items

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