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RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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2..217
DNA (216bp) protein (72aa)
integral membrane protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative integral membrane protein id=4690488 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
integral membrane protein
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(304..1884)
DNA (1581bp) protein (527aa)
dan; D-aminoacylase (EC:3.5.1.81) Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
dan; D-aminoacylase (EC:3.5.1.81) id=14430567 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
dan; D-aminoacylase (EC:3.5.1.81)
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2404..2949
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF0_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2973..3986
DNA (1014bp) protein (338aa)
nitrite reductase (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Nitrite reductase, copper-containing n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R6X8_KANKD
nitrite reductase
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4217..5512
DNA (1296bp) protein (432aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein id=2244440 bin=GWB2_Proteobacteria_55_19 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6069..6224
DNA (156bp) protein (52aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6248..6775
DNA (528bp) protein (176aa)
cyoA; heme/copper-type cytochrome/quinol oxidase subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] id=15192577 bin=GWC2_NOV_55_46 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
cytochrome c oxidase subunit II Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cyoA; heme/copper-type cytochrome/quinol oxidase subunit 2
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6846..8384
DNA (1539bp) protein (513aa)
cyoB; heme/copper-type cytochrome/quinol oxidase subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Heme/copper-type cytochrome/quinol oxidase, subunit 1 id=3823489 bin=GWF2_Methylomirabilis_70_14 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyoB; heme/copper-type cytochrome/quinol oxidase subunit 1
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_9
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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8527..8661
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

8774..9685
DNA (912bp) protein (304aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative Protoheme IX farnesyltransferase 1 (EC:2.5.1.-)
Protoheme IX farnesyltransferase id=15193601 bin=GWC2_NOV_55_46 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

9686..10558
DNA (873bp) protein (291aa)
hypothetical protein; K07152 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein SCO1/SenC/PrrC id=4583995 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
electron transport protein SCO1/SenC
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10555..10656
DNA (102bp) protein (34aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10685..12862
DNA (2178bp) protein (726aa)
cytochrome b/b6-like Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4583991 bin=GWC2_Deltaproteobacteria_42_51 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cytochrome b/b6-like
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12899..14215
DNA (1317bp) protein (439aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, subunit F n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ07_9BACT
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

14166..16247
DNA (2082bp) protein (694aa)
4Fe-4S ferredoxin Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4583991 bin=GWC2_Deltaproteobacteria_42_51 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
4Fe-4S ferredoxin
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(16224..16667)
DNA (444bp) protein (148aa)
Rhodanese-related sulfurtransferase protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Rhodanese-related sulfurtransferase protein id=4583992 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Cycloclasticus taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Rhodanese-related sulfurtransferase protein
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

16884..17198
DNA (315bp) protein (105aa)
cytoplasmic protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cytoplasmic protein
Hypothetical cytosolic protein id=1937763 bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

17191..17601
DNA (411bp) protein (137aa)
Phytochrome, two-component sensor histidine kinase n=1 Tax=Crocosphaera watsonii WH 0005 RepID=T2IXX0_CROWT
response regulator receiver protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
response regulator receiver protein
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

17588..18592
DNA (1005bp) protein (335aa)
ArsR family transcriptional regulator n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039F4B64
two-component hybrid sensor and regulator Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
two-component hybrid sensor and regulator
RIFCSPLOWO2_02_DPX4_39_17_rifcsplowo2_02_sub10_scaffold_799_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

18637..18975
DNA (339bp) protein (113aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase id=4082176 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 20 items

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