ggKbase home page

rifcsplowo2_02_scaffold_11078

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_11078_1
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3..764)
DNA (762bp) protein (254aa)
id=3409050 Tax=GWA2_Elusimicrobia_62_23_curated
id=3409050 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
rifcsplowo2_02_scaffold_11078_2
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(733..3261)
DNA (2529bp) protein (843aa)
Nitrogenase (EC:1.18.6.1); K02588 nitrogenase iron protein NifH [EC:1.18.6.1] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Nitrogenase (EC:1.18.6.1)
Putative nitrogenase iron protein id=3409053 bin=GWC2_Elusimicrobia_64_44 species=Flavonifractor plautii genus=Flavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
rifcsplowo2_02_scaffold_11078_3
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(3374..5356)
DNA (1983bp) protein (661aa)
Tetratricopeptide TPR_2 repeat-containing protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
hypothetical protein id=1856415 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good - rbh
tetratricopeptide repeat protein,putative transcriptional regulator
rifcsplowo2_02_scaffold_11078_4
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

5517..7298
DNA (1782bp) protein (594aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
asnB; asparagine synthase (EC:6.3.5.4)
Asparagine synthetase id=4926101 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
rifcsplowo2_02_scaffold_11078_5
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(7384..8574)
DNA (1191bp) protein (397aa)
aspartate/ornithine carbamoyltransferase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Uncharacterized protein id=2323430 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
aspartate/ornithine carbamoyltransferase
rifcsplowo2_02_scaffold_11078_6
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

8727..10133
DNA (1407bp) protein (469aa)
His-Xaa-Ser system radical SAM maturase HxsB Tax=GWA2_Elusimicrobia_62_23_curated
Radical SAM domain protein id=2323431 bin=GWA2_Elusi_like_61_42 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
radical SAM domain-containing protein
rifcsplowo2_02_scaffold_11078_7
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

10240..11376
DNA (1137bp) protein (379aa)
id=4163295 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
id=4163295 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
rifcsplowo2_02_scaffold_11078_8
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

11393..11647
DNA (255bp) protein (85aa)
regulator of nonsense transcripts Tax=GWD2_Elusimicrobia_63_28_curated
Putative uncharacterized protein id=4163296 bin=GWC2_Elusimicrobia_64_44 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
rifcsplowo2_02_scaffold_11078_9
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

11657..12772
DNA (1116bp) protein (372aa)
id=4163297 Tax=GWD2_Elusimicrobia_63_28_curated
id=4163297 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
rifcsplowo2_02_scaffold_11078_10
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

12769..13734
DNA (966bp) protein (322aa)
radical SAM domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Radical SAM domain protein id=4163298 bin=GWC2_Elusimicrobia_64_44 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
radical SAM domain-containing protein
rifcsplowo2_02_scaffold_11078_11
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(13718..14428)
DNA (711bp) protein (237aa)
Polysaccharide deacetylase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Polysaccharide deacetylase id=4163299 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
rifcsplowo2_02_scaffold_11078_12
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14425..15726)
DNA (1302bp) protein (434aa)
Coenzyme PQQ synthesis protein E id=4163353 bin=GWC2_Elusimicrobia_64_44 species=Novosphingobium nitrogenifigens genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
pyrroloquinoline quinone biosynthesis protein PqqE; K06139 pyrroloquinoline quinone biosynthesis protein E Tax=GWC2_Elusimicrobia_64_44_curated
radical SAM protein
rifcsplowo2_02_scaffold_11078_13
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15719..16870)
DNA (1152bp) protein (384aa)
Radical SAM domain-containing protein Tax=GWD2_Elusimicrobia_63_28_curated
Hypothetical molybdenum cofactor biosynthesis protein A id=4163354 bin=GWC2_Elusimicrobia_64_44 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
radical SAM domain-containing protein
rifcsplowo2_02_scaffold_11078_14
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(16889..17707)
DNA (819bp) protein (273aa)
polysaccharide deactylase family protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Uncharacterized protein id=4163355 bin=GWC2_Elusimicrobia_64_44 species=Halogranum salarium genus=Halogranum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
polysaccharide deactylase family protein
rifcsplowo2_02_scaffold_11078_15
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17704..19491)
DNA (1788bp) protein (596aa)
Fe-S oxidoreductase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Radical SAM domain protein id=4437692 bin=GWC2_Elusimicrobia_64_44 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
Fe-S oxidoreductase
rifcsplowo2_02_scaffold_11078_16
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(19491..20168)
DNA (678bp) protein (226aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
rifcsplowo2_02_scaffold_11078_17
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(20184..21002)
DNA (819bp) protein (273aa)
Peptidase family protein U32 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Peptidase family protein U32 id=2323441 bin=GWA2_Elusi_like_61_42 species=Eubacterium limosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
rifcsplowo2_02_scaffold_11078_18
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(21034..22071)
DNA (1038bp) protein (346aa)
Radical SAM domain protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Radical SAM domain protein id=2323445 bin=GWA2_Elusi_like_61_42 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
radical SAM domain protein
rifcsplowo2_02_scaffold_11078_19
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(22085..22690)
DNA (606bp) protein (202aa)
asnB; asparagine synthetase [glutamine-hydrolyzing] 1 (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase id=3804688 bin=GWA2_Elusimicrobia_66_18 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Displaying 19 items

View Taxonomy