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rifcsplowo2_02_scaffold_38338

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_38338_1
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
hypothetical protein Tax=CG_Elusi_01
Uncharacterized protein id=3183064 bin=GWA2_Elusi-like_A8_64_40 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
rifcsplowo2_02_scaffold_38338_2
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

comp(209..1156)
DNA (948bp) protein (316aa)
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=GWD2_Elusimicrobia_63_28_curated
Hydrogenase expression/formation protein HypE id=2151472 bin=GWB2_Elusimicrobium_63_22 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good - rbh
hydrogenase expression/formation protein HypE
rifcsplowo2_02_scaffold_38338_3
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(1137..2084)
DNA (948bp) protein (316aa)
lysR; LysR family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Transcriptional regulator, LysR family id=2151473 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good - rbh
lysR; LysR family transcriptional regulator
rifcsplowo2_02_scaffold_38338_4
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(2090..3217)
DNA (1128bp) protein (376aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Hydrogenase expression/formation protein HypD id=4990812 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
hydrogenase expression/formation protein HypD
rifcsplowo2_02_scaffold_38338_5
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(3214..3462)
DNA (249bp) protein (83aa)
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Hydrogenase assembly chaperone HypC/HupF id=2049636 bin=GWB2_Elusimicrobia_63_16 species=Collinsella tanakaei genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
hydrogenase assembly chaperone HypC/HupF
rifcsplowo2_02_scaffold_38338_trna_3
unknown

Not on your lists

comp(3747..3830)
DNA (84bp)
transferRNA
rifcsplowo2_02_scaffold_38338_trna_2
unknown

Not on your lists

comp(3857..3940)
DNA (84bp)
transferRNA
rifcsplowo2_02_scaffold_38338_6
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(4015..4800)
DNA (786bp) protein (262aa)
type II secretion system subunit O; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_Elusi_01
Type 4 prepilin-like proteins leader peptide-processing enzyme id=2049630 bin=GWB2_Elusimicrobia_63_16 species=uncultured bacterium URE12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia rbh
type II secretion system subunit O
rifcsplowo2_02_scaffold_38338_7
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(4869..5330)
DNA (462bp) protein (154aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Putative uncharacterized protein id=4542777 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
rifcsplowo2_02_scaffold_38338_trna_1
unknown

Not on your lists

comp(5542..5628)
DNA (87bp)
transferRNA
rifcsplowo2_02_scaffold_38338_8
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

5691..6179
DNA (489bp) protein (163aa)
SsrA-binding protein; K03664 SsrA-binding protein Tax=CG_Elusi_01
SsrA-binding protein id=2151478 bin=GWB2_Elusimicrobium_63_22 species=uncultured bacterium URE12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
SsrA-binding protein
rifcsplowo2_02_scaffold_38338_9
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(6253..6969)
DNA (717bp) protein (239aa)
hypothetical protein Tax=CG_Elusi_01
Putative uncharacterized protein id=2787917 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifcsplowo2_02_scaffold_38338_10
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(6982..8340)
DNA (1359bp) protein (453aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=CG_Elusi_01
Type IV-A pilus assembly ATPase PilB id=3183039 bin=GWA2_Elusi-like_A8_64_40 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia rbh
type IV pilus assembly protein PilB
Displaying 13 items

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