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rifcsplowo2_02_scaffold_25312

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_25312_1
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

Not on your lists

23..622
-----------------
DNA (600bp)
protein (200aa)
YceI id=4233089 bin=GWC2_Elusimicrobia_64_44 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
protein yceI precursor
Tax=BJP_08E140C01_Elusimicrobia_64_11
rifcsplowo2_02_scaffold_25312_2
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(701..2575)
-----------------
DNA (1875bp)
protein (625aa)
Oligopeptide transporter, OPT superfamily id=4208148 bin=GWA2_Elusimicrobia_56_46 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
OPT family oligopeptide transporter Tax=GWC2_Elusimicrobia_56_31_curated
OPT family oligopeptide transporter
rifcsplowo2_02_scaffold_25312_3
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2659..3030)
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XU06_DESMR
hypothetical protein Tax=GWF2_Elusimicrobia_62_30_curated
hypothetical protein
rifcsplowo2_02_scaffold_25312_4
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3147..3836)
-----------------
DNA (690bp)
protein (230aa)
Integral membrane sensor signal transduction histidine kinase id=4560776 bin=GWA2_Elusi_like_61_42 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
integral membrane sensor signal transduction histidine kinase Tax=GWA2_Elusimicrobia_61_42_curated
integral membrane sensor signal transduction histidine kinase
rifcsplowo2_02_scaffold_25312_5
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

3955..4971
-----------------
DNA (1017bp)
protein (339aa)
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=GWF2_Elusimicrobia_62_30_curated
Dual-specificity RNA methyltransferase RlmN id=4560777 bin=GWA2_Elusi_like_61_42 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi rbh
radical SAM enzyme, Cfr family
rifcsplowo2_02_scaffold_25312_6
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(5026..5724)
-----------------
DNA (699bp)
protein (233aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
DTW domain containing protein id=4677587 bin=GWA2_Elusimicrobia_56_46 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
rifcsplowo2_02_scaffold_25312_7
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(5736..6395)
-----------------
DNA (660bp)
protein (220aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
rifcsplowo2_02_scaffold_25312_8
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(6470..6775)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
hypothetical protein id=2260206 bin=GWB2_Elusimicrobia_63_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
rifcsplowo2_02_scaffold_25312_9
GWB2_Elusimicrobia_63_16_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6834..7520)
-----------------
DNA (687bp)
protein (229aa)
DTW domain containing protein id=3529946 bin=GWA2_Elusi-like_A8_64_40 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia rbh
DTW domain containing protein Tax=GWB2_Elusimicrobia_63_16_curated
DTW domain containing protein
rifcsplowo2_02_scaffold_25312_10
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

Not on your lists

7691..8578
-----------------
DNA (888bp)
protein (296aa)
zinc transporter ZupT; K07238 zinc transporter, ZIP family Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
Zinc transporter ZupT id=2968599 bin=GWC2_Elusimicrobia_64_44 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
zinc transporter ZupT
rifcsplowo2_02_scaffold_25312_11
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(8602..9636)
-----------------
DNA (1035bp)
protein (345aa)
GTPase EngC; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Putative ribosome biogenesis GTPase RsgA id=4985963 bin=GWA2_Elusimicrobia_56_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
rsgA; ribosome small subunit biogenesis GTPase RsgA
rifcsplowo2_02_scaffold_25312_12
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(9876..10625)
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Putative uncharacterized protein id=2218707 bin=GWB2_Elusimicrobium_63_22 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good - rbh
hypothetical protein
rifcsplowo2_02_scaffold_25312_13
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(10699..11298)
-----------------
DNA (600bp)
protein (200aa)
GCN5-related N-acetyltransferase id=5008802 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
N-acetyltransferase GCN5 Tax=CG_Elusi_01
N-acetyltransferase GCN5
rifcsplowo2_02_scaffold_25312_14
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11317..11547)
-----------------
DNA (231bp)
protein (77aa)
Tax=BJP_08E140C01_Coriobacteriales_62_12
rifcsplowo2_02_scaffold_25312_15
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

Not on your lists

comp(11673..12227)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein id=4677589 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=BJP_08E140C01_Elusimicrobia_64_11
rifcsplowo2_02_scaffold_25312_16
unknown

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comp(12283..12501)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

Displaying 16 items

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