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rifcsplowo2_02_scaffold_5603

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_5603_1
unknown

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366..626
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5603_2
AR20, Woesearchaeaota, DPANN, Archaea

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1079..1597
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein
id=5103172 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_02_scaffold_5603_3
AR4, Woesearchaeaota, DPANN, Archaea

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1601..2416
-----------------
DNA (816bp)
protein (272aa)
phage integrase family protein id=5043988 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
phage integrase family protein Tax=AR4
Phage integrase family protein
rifcsplowo2_02_scaffold_5603_4

Not on your lists

comp(2411..2977)
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51023.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
seg id=5799965 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_02_scaffold_5603_5

Not on your lists

comp(3046..3606)
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S21807 {ECO:0000313|EMBL:GAG16603.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_02_scaffold_5603_6

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comp(3646..4314)
-----------------
DNA (669bp)
protein (223aa)
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_02_scaffold_5603_7
CG_Woesearch_02, Woesearchaeota, Archaea

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4809..5444
-----------------
DNA (636bp)
protein (212aa)
methyltransferase-like protein Tax=CG_Woesearch_02
RNA methylase id=5799774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA methylase
rifcsplowo2_02_scaffold_5603_8
CG_Woesearch_02, Woesearchaeota, Archaea

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5489..5791
-----------------
DNA (303bp)
protein (101aa)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=CG_Woesearch_02
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L
rifcsplowo2_02_scaffold_5603_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

5879..6397
-----------------
DNA (519bp)
protein (173aa)
id=5041897 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_02_scaffold_5603_10
unknown

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6391..6624
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5603_11

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6671..7372
-----------------
DNA (702bp)
protein (234aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsplowo2_02_scaffold_5603_12
CG_Woesearch_02, Woesearchaeota, Archaea

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7422..8843
-----------------
DNA (1422bp)
protein (474aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Woesearch_02
Phosphoesterase, RecJ-like protein
rifcsplowo2_02_scaffold_5603_13
unknown

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comp(8897..9376)
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5603_14

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comp(9445..9717)
-----------------
DNA (273bp)
protein (91aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Regulatory protein MarR {ECO:0000313|EMBL:KHO46988.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_02_scaffold_5603_15
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

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comp(9832..10395)
-----------------
DNA (564bp)
protein (188aa)
Uncharacterized protein id=4010368 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein HGP-15 {ECO:0000313|EMBL:BAE95215.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Ni
hypothetical protein
rifcsplowo2_02_scaffold_5603_16
AR9, Woesearchaeaota, DPANN, Archaea

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comp(10412..10834)
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_02_scaffold_5603_17

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comp(10850..12136)
-----------------
DNA (1287bp)
protein (429aa)
hypothetical protein
seg id=5041707 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47959.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_02_scaffold_5603_18
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12144..12617)
-----------------
DNA (474bp)
protein (158aa)
seg id=5041709 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_02_scaffold_5603_19
unknown

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comp(12635..12838)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5603_20

Not on your lists

comp(12894..13097)
-----------------
DNA (204bp)
protein (68aa)
seg id=5800413 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61744.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_02_scaffold_5603_21
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

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comp(13160..14263)
-----------------
DNA (1104bp)
protein (368aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW137N13 RepID=B3T4X3_9ARCH id=725233 bin=RAAC2_WWE3 species=uncultured marine crenarchaeote HF4000_ANIW137N13 genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=RAAC2_WWE3 organism_group=WWE3
hypothetical protein
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
rifcsplowo2_02_scaffold_5603_22
unknown

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comp(14563..14820)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5603_23
unknown

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comp(14916..15092)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

Displaying 23 items

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