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rifcsplowo2_02_scaffold_5675

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_5675_1
AR11, Woesearchaeaota, DPANN, Archaea

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2..286
-----------------
DNA (285bp)
protein (95aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=AR11
dolichol-phosphate mannosyltransferase (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1P2_9BACT
rifcsplowo2_02_scaffold_5675_2
AR11, Woesearchaeaota, DPANN, Archaea

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394..1389
-----------------
DNA (996bp)
protein (332aa)
glycosyl transferase group 1 Tax=AR11
glycosyl transferase group 1 id=5045917 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase group 1
rifcsplowo2_02_scaffold_5675_3

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1403..2899
-----------------
DNA (1497bp)
protein (499aa)
Putative uncharacterized protein id=5045916 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46261.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_02_scaffold_5675_4
CG_Pacearch_04, Pacearchaeota, Archaea

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2970..3926
-----------------
DNA (957bp)
protein (319aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.83) Tax=CG_Pacearch_04
Glycosyl transferase family 2 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRB3_GRAMM
family 2 glycosyl transferase
rifcsplowo2_02_scaffold_5675_5
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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comp(3942..4883)
-----------------
DNA (942bp)
protein (314aa)
Chromosome partitioning protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK3_9BACT
parA3; ATPase; K03496 chromosome partitioning protein Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
cobyrinic acid ac-diamide synthase
rifcsplowo2_02_scaffold_5675_6

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comp(5020..5883)
-----------------
DNA (864bp)
protein (288aa)
hbu:Hbut_0202 succinyl-CoA synthetase alpha chain (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] id=95737 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
rifcsplowo2_02_scaffold_5675_7

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comp(5867..6853)
-----------------
DNA (987bp)
protein (329aa)
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] id=96600 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Uncharacterized protein {ECO:0000313|EMBL:EKD49924.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsplowo2_02_scaffold_5675_8
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(6850..7254)
-----------------
DNA (405bp)
protein (135aa)
porG; pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, subunit gamma (EC:1.2.7.3); K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=RI
Similar to oxoacid:ferredoxin oxidoreductase gamma chain n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1H7_9BACT id=96601 bin=ACD63 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsplowo2_02_scaffold_5675_9

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comp(7247..7966)
-----------------
DNA (720bp)
protein (240aa)
Pyruvate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured bacterium RepID=K1ZJJ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN10409.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
2-oxoglutarate ferredoxin oxidoreductase subunit beta
rifcsplowo2_02_scaffold_5675_10
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

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comp(7944..8963)
-----------------
DNA (1020bp)
protein (340aa)
PorA4; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_16_Aminicenantes_66_30_curated
PorA4; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=24486960 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
2-oxoglutarate synthase (EC:1.2.7.3)
rifcsplowo2_02_scaffold_5675_11
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

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comp(9021..9731)
-----------------
DNA (711bp)
protein (237aa)
Transcriptional regulator, Crp/Fnr family id=2182239 bin=GWE2_Spirochaete_31_10 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
CarD family transcriptional regulator Tax=GWE2_Spirochaetes_31_10_curated
rifcsplowo2_02_scaffold_5675_12

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comp(9719..11359)
-----------------
DNA (1641bp)
protein (547aa)
kgd; TPP-dependent 2-oxoglutarate decarboxylase Kgd (EC:5.5.1.4 2.2.1.6)
acetolactate synthase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B62DFA
Uncharacterized protein {ECO:0000313|EMBL:KKT25718.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
rifcsplowo2_02_scaffold_5675_13

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comp(11419..12792)
-----------------
DNA (1374bp)
protein (458aa)
Aldehyde dehydrogenase family protein n=1 Tax=uncultured archaeon RepID=I3RKJ3_9ARCH
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:AFK24853.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
gabD; succinate-semialdehyde dehydrogenase
rifcsplowo2_02_scaffold_5675_14
unknown

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12848..13042
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5675_15
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(13223..14029)
-----------------
DNA (807bp)
protein (269aa)
Tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TBJ3_METSL
Tryptophan synthase alpha chain {ECO:0000313|EMBL:KKU99854.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
rifcsplowo2_02_scaffold_5675_16
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(14026..14973)
-----------------
DNA (948bp)
protein (316aa)
tryptophan synthase beta chain (EC:4.2.1.20)
tryptophan synthase, beta subunit; K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=5240922 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tryptophan synthase beta chain {ECO:0000313|EMBL:KKU99855.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
rifcsplowo2_02_scaffold_5675_17
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(15038..15520)
-----------------
DNA (483bp)
protein (161aa)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZDY0_9BACT
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000313|EMBL:KKU99856.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
trpF; phosphoribosyl anthranilate isomerase
rifcsplowo2_02_scaffold_5675_18
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(15633..16022)
-----------------
DNA (390bp)
protein (130aa)
trpC; indole-3-glycerol phosphate synthase TrpC (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=7 Tax=Clostridium thermocellum RepID=TRPC_CLOTH
Indole-3-glycerol phosphate synthase {ECO:0000313|EMBL:KKU99857.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Displaying 18 items

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