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rifcsplowo2_02_scaffold_6314

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_6314_1
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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206..949
-----------------
DNA (744bp)
protein (248aa)
Transposase n=2 Tax=delta proteobacterium NaphS2 RepID=D8F0S2_9DELT
Transposase {ECO:0000313|EMBL:EFK10625.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
transposase
rifcsplowo2_02_scaffold_6314_2
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

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1054..1608
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
Uncharacterized protein (Fragment) id=5800258 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_02_scaffold_6314_3
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(1585..2784)
-----------------
DNA (1200bp)
protein (400aa)
Sodium/proton-potassium antiporter GerN, CPA2 family n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FR69_METHJ rbh
sodium/hydrogen exchanger Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
sodium/hydrogen exchanger
rifcsplowo2_02_scaffold_6314_4
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

comp(2872..4203)
-----------------
DNA (1332bp)
protein (444aa)
Glutamate-cysteine ligase family 2 Tax=GWA2_OD1_44_12
Uncharacterized protein id=5049175 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Glutamate-cysteine ligase family 2(GCS2)
rifcsplowo2_02_scaffold_6314_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(4244..4696)
-----------------
DNA (453bp)
protein (151aa)
Putative mscS family protein AF_1546 n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KBH7_METBM
mscS family protein Tax=CG_Aenigma_01
MscS mechanosensitive ion channel
rifcsplowo2_02_scaffold_6314_6
unknown

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comp(4741..4926)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsplowo2_02_scaffold_6314_7

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comp(4913..5947)
-----------------
DNA (1035bp)
protein (345aa)
mechanosensitive ion channel protein MscS n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6B551
Uncharacterized protein {ECO:0000313|EMBL:KKM64859.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MscS Mechanosensitive ion channel
rifcsplowo2_02_scaffold_6314_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5967..7907)
-----------------
DNA (1941bp)
protein (647aa)
putative glycosyltransferase (group 1) (EC:2.4.1.-) Tax=CG_Woesearch_02
Glycosyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9F2_METCZ
glycosyltransferase
rifcsplowo2_02_scaffold_6314_9
unknown

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7982..8275
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

rifcsplowo2_02_scaffold_6314_10
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(8323..9507)
-----------------
DNA (1185bp)
protein (395aa)
Putative Na(+)/H(+) antiporter n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0D7_UNCMA
sodium/hydrogen exchanger; K11105 cell volume regulation protein A Tax=CG_Woesearch_03
putative Na(+)/H(+) antiporter
rifcsplowo2_02_scaffold_6314_11
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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9615..10958
-----------------
DNA (1344bp)
protein (448aa)
Phosphomethylpyrimidine synthase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QEV5_9CYAN
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RBG_16_Planctomycetes_43_13_curated
thiC; thiamine biosynthesis protein ThiC
rifcsplowo2_02_scaffold_6314_12
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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11050..12081
-----------------
DNA (1032bp)
protein (344aa)
Signal-transducing histidine kinase n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30031_ARCFU
Osmosensitive K+ channel Signal transduction histidine kinase {ECO:0000313|EMBL:KJR41585.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" sour
signal-transducing histidine kinase
rifcsplowo2_02_scaffold_6314_13
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(12104..13036)
-----------------
DNA (933bp)
protein (311aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semiald
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWN8_METFV
rifcsplowo2_02_scaffold_6314_14
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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comp(13079..14251)
-----------------
DNA (1173bp)
protein (391aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_RIF03_38_10_curated
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYF0_METFV
rifcsplowo2_02_scaffold_6314_15
Thermoanaerobacter brockii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(14241..15065)
-----------------
DNA (825bp)
protein (275aa)
Acetylglutamate kinase n=2 Tax=Thermoanaerobacter RepID=ARGB_THEP3
acetylglutamate kinase
Acetylglutamate kinase {ECO:0000313|EMBL:ADV78858.1}; TaxID=509193 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaer
rifcsplowo2_02_scaffold_6314_16
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15082..16242)
-----------------
DNA (1161bp)
protein (387aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium sp. CAG:221 RepID=R6FMG9_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sa
rifcsplowo2_02_scaffold_6314_17
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16244..17551)
-----------------
DNA (1308bp)
protein (436aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=CG_Desulfob_01
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE80_THET1
rifcsplowo2_02_scaffold_6314_18

Not on your lists

comp(17559..18479)
-----------------
DNA (921bp)
protein (307aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] id=5240722 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1579370 species="Archaea.;" sour
rifcsplowo2_02_scaffold_6314_19
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(18564..19529)
-----------------
DNA (966bp)
protein (322aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RBG_16_Aminicenantes_63_16_curated
Argininosuccinate synthase n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=ASSY_THENN
argininosuccinate synthase
rifcsplowo2_02_scaffold_6314_20
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(19501..19782)
-----------------
DNA (282bp)
protein (94aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=GWA2_WOR_2_47_8_curated
Argininosuccinate synthase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4R8_9DELT
argininosuccinate synthase
rifcsplowo2_02_scaffold_6314_21
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19949..20581
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR78594.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein id=5048447 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_02_scaffold_6314_22
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(20584..20829)
-----------------
DNA (246bp)
protein (82aa)
Gas vesicle protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K3J2_9EURY
Gas vesicle protein
Gas vesicle protein {ECO:0000313|EMBL:AGB39842.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
rifcsplowo2_02_scaffold_6314_23
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(20816..21589)
-----------------
DNA (774bp)
protein (258aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000369E8E0
gas vesicle synthesis GvpLGvpF Tax=RBG_19FT_COMBO_JS1_35_14_curated
gas vesicle synthesis GvpLGvpF
rifcsplowo2_02_scaffold_6314_24
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(21582..21923)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FM1_METBF
Gas vesicle protein GvpK
Gas vesicle protein GvpK {ECO:0000313|EMBL:AKB45327.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina
rifcsplowo2_02_scaffold_6314_25
unknown

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comp(21892..22071)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsplowo2_02_scaffold_6314_26
unknown

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comp(22088..22573)
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsplowo2_02_scaffold_6314_27
unknown

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comp(22554..22763)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

Displaying 27 items

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