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rifcsplowo2_02_scaffold_14025

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_14025_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..543)
-----------------
DNA (543bp)
protein (181aa)
aspartate ammonia-lyase (EC:4.3.1.1)
aspartate ammonia-lyase n=1 Tax=Bacillus oceanisediminis RepID=UPI0002FB8FA3
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_02_scaffold_14025_2
unknown

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comp(814..1083)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsplowo2_02_scaffold_14025_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1121..2011)
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034B7E12
Ion transport 2 domain protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_02_scaffold_14025_4
AR11, Woesearchaeaota, DPANN, Archaea

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2123..2560
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S12 Tax=AR11
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
rifcsplowo2_02_scaffold_14025_5
CG_Woesearch_02, Woesearchaeota, Archaea

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2570..3169
-----------------
DNA (600bp)
protein (200aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=CG_Woesearch_02
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5043965 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
rifcsplowo2_02_scaffold_14025_6
AR10, Diapherotrites, DPANN, Archaea

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3262..3750
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein
Putative uncharacterized protein id=5241735 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative uncharacterized protein Tax=AR10
rifcsplowo2_02_scaffold_14025_7
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

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3747..4037
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
Uncharacterised protein family UPF0175 id=5241736 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_02_scaffold_14025_8
AR4, Woesearchaeaota, DPANN, Archaea

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4155..5207
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003804E87
mscS-4; Small-conductance mechanosensitive channel Tax=AR4
MscS mechanosensitive ion channel
rifcsplowo2_02_scaffold_14025_9
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(5213..7939)
-----------------
DNA (2727bp)
protein (909aa)
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10) Tax=RBG_16_Bathyarchaeota_57_9_curated
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=5799554 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_02_scaffold_14025_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(8207..8620)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein
hypothetical protein Tax=AR11
id=5799548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_02_scaffold_14025_11
unknown

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comp(8617..8754)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

Displaying 11 items

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