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rifcsplowo2_02_scaffold_13740

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_13740_1
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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158..1603
-----------------
DNA (1446bp)
protein (482aa)
Transporter n=1 Tax=Moorea producens 3L RepID=F4XXP1_9CYAN
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
Sodium-dependent transporter
rifcsplowo2_02_scaffold_13740_2
GWF2_OD1_36_839, Moranbacteria, Parcubacteria, Bacteria

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1644..2579
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FGL1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKQ16463.1}; TaxID=1618723 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_36_839.;"
hypothetical protein
rifcsplowo2_02_scaffold_13740_3
AR11, Woesearchaeaota, DPANN, Archaea

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2590..4140
-----------------
DNA (1551bp)
protein (517aa)
Glycyl-tRNA synthetase Tax=AR11
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_02_scaffold_13740_4
AR11, Woesearchaeaota, DPANN, Archaea

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4144..4941
-----------------
DNA (798bp)
protein (266aa)
Calcineurin-like phosphoesterase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LW95_SYNAS
calcineurin-like phosphoesterase Tax=AR11
calcineurin-like phosphoesterase
rifcsplowo2_02_scaffold_13740_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4966..5952)
-----------------
DNA (987bp)
protein (329aa)
AsnC/Lrp family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
leucine-responsive regulatory protein 1; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5043670 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_02_scaffold_13740_6
unknown

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6069..6536
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsplowo2_02_scaffold_13740_7

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6564..7043
-----------------
DNA (480bp)
protein (160aa)
Phosphodiesterase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8H0_HALJB
Uncharacterized protein {ECO:0000313|EMBL:KHO49571.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
phosphodiesterase
rifcsplowo2_02_scaffold_13740_8
AR11, Woesearchaeaota, DPANN, Archaea

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7090..7509
-----------------
DNA (420bp)
protein (140aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR11
Histidine triad (HIT) protein id=5800533 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histidine triad (HIT) protein
rifcsplowo2_02_scaffold_13740_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(7807..7971)
-----------------
DNA (165bp)
protein (55aa)
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_13740_10
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8186..8737
-----------------
DNA (552bp)
protein (184aa)
Thioredoxin-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALY1_IGNAJ
thioredoxin-like protein
Thioredoxin-like protein {ECO:0000313|EMBL:AFH49988.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteri
rifcsplowo2_02_scaffold_13740_11
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8931..9929)
-----------------
DNA (999bp)
protein (333aa)
WcaA; cell wall biosynthesis glycosyltransferase
glycosyl transferase family protein id=5048704 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
rifcsplowo2_02_scaffold_13740_12
AR11, Woesearchaeaota, DPANN, Archaea

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comp(10200..10556)
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein Tax=AR11
rifcsplowo2_02_scaffold_13740_13
unknown

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11253..11465
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsplowo2_02_scaffold_13740_14

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11511..12113
-----------------
DNA (603bp)
protein (201aa)
Marine sediment metagenome DNA, contig: S01H1_S18736 {ECO:0000313|EMBL:GAG26490.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_02_scaffold_13740_15

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12274..12744
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein
id=5103004 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62285.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_13740_16
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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12746..13414
-----------------
DNA (669bp)
protein (223aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B5BE3C
rifcsplowo2_02_scaffold_13740_17

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comp(13386..14384)
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5041681 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Uncharacterized protein {ECO:0000313|EMBL:KHO47933.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_02_scaffold_13740_18
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(14453..15445)
-----------------
DNA (993bp)
protein (331aa)
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=CG_Woesearch_01
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=uncultured archaeon RepID=D1JI22_9ARCH
rifcsplowo2_02_scaffold_13740_19
R_OP11_Roizmanbacteria_39_12b, Roizmannbacteria, Microgenomates, Bacteria

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15578..15928
-----------------
DNA (351bp)
protein (117aa)
Secreted protein n=1 Tax=mine drainage metagenome RepID=T1CFT2_9ZZZZ
putative secreted protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12b_curated
hypothetical protein
rifcsplowo2_02_scaffold_13740_20
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(15981..16475)
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein n=3 Tax=Aminicenantes RepID=UPI00037C434B
hypothetical protein; K07133 Tax=RBG_13_RIF_OD1_07_37_56_curated
hypothetical protein
rifcsplowo2_02_scaffold_13740_21
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(16701..16928)
-----------------
DNA (228bp)
protein (76aa)
ATPase; K07133 Tax=RBG_19FT_COMBO_JS1_35_14_curated
ATPase id=4685347 bin=GWA2_Elusimicrobia_51_34 species=Candidatus Korarchaeum cryptofilum genus=Candidatus Korarchaeum taxon_order=unknown taxon_class=unknown phylum=Korarchaeota tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hypothetical protein
rifcsplowo2_02_scaffold_13740_22

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comp(17075..17698)
-----------------
DNA (624bp)
protein (208aa)
DNA polymerase beta family {ECO:0000313|EMBL:KHO53091.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
PHP domain protein id=4935158 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PHP domain-containing protein
Displaying 22 items

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