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rifcsplowo2_02_scaffold_22482

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_22482_1
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3..803)
-----------------
DNA (801bp)
protein (267aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGW9_ARCPA id=5103210 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein Tax=AR11
hypothetical protein
rifcsplowo2_02_scaffold_22482_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(804..1835)
-----------------
DNA (1032bp)
protein (344aa)
Flap structure-specific endonuclease; K04799 flap endonuclease-1 [EC:3.-.-.-] Tax=CG_Woesearch_02
rad2; flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5046346 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
flap endonuclease-1
rifcsplowo2_02_scaffold_22482_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1836..2690)
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5800109 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_02_scaffold_22482_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(2729..3307)
-----------------
DNA (579bp)
protein (193aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
tRNA-intron endonuclease id=5800108 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA-intron endonuclease
rifcsplowo2_02_scaffold_22482_5
unknown

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comp(3567..3749)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

rifcsplowo2_02_scaffold_22482_6
CG_Pacearch_04, Pacearchaeota, Archaea

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4168..5058
-----------------
DNA (891bp)
protein (297aa)
rnz; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=CG_Pacearch_04
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
rifcsplowo2_02_scaffold_22482_7
CG_Woesearch_01, Woesearchaeota, Archaea

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5061..5453
-----------------
DNA (393bp)
protein (131aa)
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type Tax=CG_Woesearch_01
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type id=5046341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Resolvase, Holliday junction-type
rifcsplowo2_02_scaffold_22482_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5468..5653)
-----------------
DNA (186bp)
protein (62aa)
seg id=5800104 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsplowo2_02_scaffold_22482_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(5745..6353)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Displaying 9 items

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