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rifcsplowo2_02_scaffold_12740

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_12740_1
AR11, Woesearchaeaota, DPANN, Archaea

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3..353
-----------------
DNA (351bp)
protein (117aa)
hypothetical protein
hypothetical protein Tax=AR11
Putative uncharacterized protein id=5048378 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_02_scaffold_12740_2
AR11, Woesearchaeaota, DPANN, Archaea

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353..1354
-----------------
DNA (1002bp)
protein (334aa)
Chromosome segregation and condensation protein, ScpB Tax=AR11
condensin subunit ScpB; K06024 segregation and condensation protein B id=5048379 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
rifcsplowo2_02_scaffold_12740_3
AR11, Woesearchaeaota, DPANN, Archaea

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1659..4121
-----------------
DNA (2463bp)
protein (821aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=AR11
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368DCE0
DNA gyrase, A subunit
rifcsplowo2_02_scaffold_12740_4
AR4, Woesearchaeaota, DPANN, Archaea

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4633..4869
-----------------
DNA (237bp)
protein (79aa)
Aspartate/glutamate/uridylate kinase id=5043749 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Aspartate/glutamate/uridylate kinase Tax=AR4
rifcsplowo2_02_scaffold_12740_5
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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4925..6184
-----------------
DNA (1260bp)
protein (420aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_02_scaffold_12740_6
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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6186..7220
-----------------
DNA (1035bp)
protein (345aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KHE93530.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Sca
Glucose-1-phosphate thymidylyltransferase id=4749385 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
rifcsplowo2_02_scaffold_12740_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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7225..7683
-----------------
DNA (459bp)
protein (153aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003720948
PA-phosphatase-like phosphoesterase Tax=RBG_13_Pacearchaeota_33_26_curated
Membrane-associated phospholipid phosphatase
rifcsplowo2_02_scaffold_12740_8
CG_Woesearch_02, Woesearchaeota, Archaea

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7671..8264
-----------------
DNA (594bp)
protein (198aa)
phosphatidate cytidylyltransferase Tax=CG_Woesearch_02
hypothetical protein id=5046911 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_02_scaffold_12740_9
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8256..9257)
-----------------
DNA (1002bp)
protein (334aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L234_9EURY
rifcsplowo2_02_scaffold_12740_10

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comp(9254..9481)
-----------------
DNA (228bp)
protein (76aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=SYS_UNCMA
Marine sediment metagenome DNA, contig: S01H1_L04617 {ECO:0000313|EMBL:GAF68777.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_02_scaffold_12740_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9520..11061)
-----------------
DNA (1542bp)
protein (514aa)
Uncharacterized protein n=4 Tax=Pyrococcus RepID=Q8U211_PYRFU id=5103802 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATPase; K06865 ATPase Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_02_scaffold_12740_12

Not on your lists

comp(11103..11384)
-----------------
DNA (282bp)
protein (94aa)
ATPase; K06865 ATPase id=5049171 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATPase {ECO:0000313|EMBL:KHO45162.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_02_scaffold_12740_13

Not on your lists

comp(11427..13481)
-----------------
DNA (2055bp)
protein (685aa)
transglutaminase domain protein id=5049172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transglutaminase protein {ECO:0000313|EMBL:KHO45163.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transglutaminase protein
rifcsplowo2_02_scaffold_12740_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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13841..14977
-----------------
DNA (1137bp)
protein (379aa)
GTP-binding protein; K06944 Tax=RBG_13_Woesearchaeota_36_6_curated
GTP-binding protein id=5799709 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
small GTP-binding protein
rifcsplowo2_02_scaffold_12740_15

Not on your lists


15207..16145
-----------------
DNA (939bp)
protein (313aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L3
Displaying 15 items

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