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rifcsplowo2_02_scaffold_17365

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_17365_1

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comp(3..539)
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein
id=5045883 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46228.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_02_scaffold_17365_2

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comp(632..1132)
-----------------
DNA (501bp)
protein (167aa)
"Winged helix" DNA-binding domain id=5800418 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61749.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_02_scaffold_17365_3
unknown

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comp(1566..1778)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsplowo2_02_scaffold_17365_4

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1872..2072
-----------------
DNA (201bp)
protein (67aa)
id=5048720 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45383.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_02_scaffold_17365_5

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2069..2578
-----------------
DNA (510bp)
protein (170aa)
id=5048721 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45384.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_02_scaffold_17365_6
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

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comp(2589..3704)
-----------------
DNA (1116bp)
protein (372aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
ald; alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Photobacterium sp. AK15 RepID=L8JF69_9GAMM rbh
rifcsplowo2_02_scaffold_17365_7
Bacteroides sp. CAG:927, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3771..4937)
-----------------
DNA (1167bp)
protein (389aa)
aspartate aminotransferase (EC:2.6.1.1)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:927 RepID=R5AXX9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX48195.1}; TaxID=1262753 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
rifcsplowo2_02_scaffold_17365_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4938..5966)
-----------------
DNA (1029bp)
protein (343aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=G3P_METST
Glyceraldehyde-3-phosphate dehydrogenase Tax=AR11
rifcsplowo2_02_scaffold_17365_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(5978..6925)
-----------------
DNA (948bp)
protein (316aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] id=5044230 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=AR4
Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase (EC:4.1.2.13)
rifcsplowo2_02_scaffold_17365_10

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comp(6978..7934)
-----------------
DNA (957bp)
protein (319aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] id=5044229 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
fructose-1,6-bisphosphatase, class II
rifcsplowo2_02_scaffold_17365_11
AR11, Woesearchaeaota, DPANN, Archaea

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8127..8981
-----------------
DNA (855bp)
protein (285aa)
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=5048689 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Nucleotidyl transferase Tax=AR11
Displaying 11 items

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