ggKbase home page

rifcsplowo2_02_scaffold_33712

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_33712_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1..378
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037763D9
hypothetical protein
hypothetical protein Tax=CG_Woesearch_02
rifcsplowo2_02_scaffold_33712_2

Not on your lists

380..1348
-----------------
DNA (969bp)
protein (323aa)
von Willebrand factor type A domain protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBD8_9EURY id=5103597 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
von Willebrand factor type A protein
von Willebrand factor type A protein {ECO:0000313|EMBL:AJF62878.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_33712_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

1506..2246
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein n=1 Tax=Helicobacter cetorum (strain ATCC BAA-429 / MIT 00-7128) RepID=I0ENE5_HELC0
hypothetical protein Tax=AR6
hypothetical protein
rifcsplowo2_02_scaffold_33712_4
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

2424..2582
-----------------
DNA (159bp)
protein (53aa)
id=5800226 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsplowo2_02_scaffold_33712_trna_1
unknown

Not on your lists

2599..2684
-----------------
DNA (86bp)
transferRNA
rifcsplowo2_02_scaffold_33712_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2733..3320
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein
id=5103347 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_02
rifcsplowo2_02_scaffold_33712_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3320..4147
-----------------
DNA (828bp)
protein (276aa)
id=5047432 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsplowo2_02_scaffold_33712_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

4168..4770
-----------------
DNA (603bp)
protein (201aa)
hypothetical protein Tax=CG_Woesearch_02
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal RNA small subunit methyltransferase C
rifcsplowo2_02_scaffold_33712_8
unknown

Not on your lists

comp(4853..5197)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsplowo2_02_scaffold_33712_9
unknown

Not on your lists

comp(5214..5453)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsplowo2_02_scaffold_33712_10
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5592..6425)
-----------------
DNA (834bp)
protein (278aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxI
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QAU0_METFO
thiazole biosynthesis protein
rifcsplowo2_02_scaffold_33712_11
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6517..7305
-----------------
DNA (789bp)
protein (263aa)
Hydroxyethylthiazole kinase {ECO:0000313|EMBL:KKG07059.1}; EC=2.7.1.50 {ECO:0000313|EMBL:KKG07059.1};; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinacea
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=THIM_METMA rbh
Displaying 12 items

View Taxonomy