ggKbase home page

rifcsplowo2_02_scaffold_41637

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_41637_1
unknown

Not on your lists

169..1071
-----------------
DNA (903bp)
protein (301aa)

This feature has no annotations

rifcsplowo2_02_scaffold_41637_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1087..1968)
-----------------
DNA (882bp)
protein (294aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] Tax=RBG_13_Bathyarchaeota_46_16b_curated
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TAP9_9EURY
rifcsplowo2_02_scaffold_41637_3

Not on your lists

comp(1983..3071)
-----------------
DNA (1089bp)
protein (363aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CBH39239.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CBH39239.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=uncultured archaeon RepID=D1JAV9_9ARCH
rifcsplowo2_02_scaffold_41637_4
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

3229..3693
-----------------
DNA (465bp)
protein (155aa)
Potassium channel protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468D3_METBF
potassium channel protein Tax=CG_Micra_04
Potassium channel protein
rifcsplowo2_02_scaffold_41637_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(3710..6409)
-----------------
DNA (2700bp)
protein (900aa)
leucyl-tRNA synthetase (EC:6.1.1.9); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Woesearch_02
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5048518 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
leucyl-tRNA synthetase (EC:6.1.1.4)
rifcsplowo2_02_scaffold_41637_6
unknown

Not on your lists

6665..7063
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsplowo2_02_scaffold_41637_7
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7293..8045
-----------------
DNA (753bp)
protein (251aa)
SPFH domain, Band 7 family protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B3L3_TURPD rbh
SPFH domain, Band 7 family protein
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:AFM11870.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella par
rifcsplowo2_02_scaffold_41637_8

Not on your lists


8188..8643
-----------------
DNA (456bp)
protein (152aa)
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S15/S13e id=5799745 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S15/S13e
rifcsplowo2_02_scaffold_41637_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(8645..9601)
-----------------
DNA (957bp)
protein (319aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2 2.7.7.8); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=AR11
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DIN9_HYDTT
rifcsplowo2_02_scaffold_41637_10
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(9668..10081)
-----------------
DNA (414bp)
protein (138aa)
type II restriction endonuclease TdeIII n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035CEB56
Restriction endonuclease, type II, MjaII {ECO:0000313|EMBL:KKQ83108.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
Restriction endonuclease, type II, MjaII
rifcsplowo2_02_scaffold_41637_11
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(10300..10518)
-----------------
DNA (219bp)
protein (73aa)
DNA methylase N-4/N-6 domain protein id=5031438 bin=GWA2_Planctomycete_KSU_39_15 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
type II DNA modification methyltransferase Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
DNA methylase N-4/N-6 domain-containing protein
Displaying 11 items

View Taxonomy