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rifcsplowo2_02_scaffold_34576

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_34576_1
unknown

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comp(1..153)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsplowo2_02_scaffold_34576_2

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comp(279..941)
-----------------
DNA (663bp)
protein (221aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=5044109 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
putative DNA glycosylase/AP lyase (EC:3.2.2.- 4.2.99.18)
Uncharacterized protein {ECO:0000313|EMBL:KHO51127.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_02_scaffold_34576_3
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(928..3102)
-----------------
DNA (2175bp)
protein (725aa)
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=CG_Woesearch_01
pcrA2; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI00035D5A47
rifcsplowo2_02_scaffold_34576_4
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3312..4850)
-----------------
DNA (1539bp)
protein (513aa)
Cleavage and polyadenylation specificity factor subunit like protein Tax=AR11
kh-domain/beta-lactamase-domain protein; K07041 id=5044630 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
kh-domain/beta-lactamase-domain-containing protein
rifcsplowo2_02_scaffold_34576_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(5131..5769)
-----------------
DNA (639bp)
protein (213aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=CG_Woesearch_01
proteasome subunit beta; K03433 proteasome beta subunit [EC:3.4.25.1] id=5044631 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Proteasome subunit beta
rifcsplowo2_02_scaffold_34576_6

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comp(5925..6701)
-----------------
DNA (777bp)
protein (259aa)
NEQ098 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MK1_NANEQ id=5102985 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO51916.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
rifcsplowo2_02_scaffold_34576_7
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6798..7538)
-----------------
DNA (741bp)
protein (247aa)
putative hemolysin Tax=GWA2_Desulfovibrionales_65_9_curated
seg id=5800732 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Displaying 7 items

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