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rifcsplowo2_02_scaffold_38213

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_38213_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(161..781)
-----------------
DNA (621bp)
protein (207aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA02_METMS
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_02_scaffold_38213_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(902..1117)
-----------------
DNA (216bp)
protein (72aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365353A
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_02_scaffold_38213_3
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1114..1686)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A24
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
rifcsplowo2_02_scaffold_38213_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


1771..2739
-----------------
DNA (969bp)
protein (323aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Woesearch_03
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
rifcsplowo2_02_scaffold_38213_5
unknown

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2767..3270
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

rifcsplowo2_02_scaffold_38213_6
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3473..4615)
-----------------
DNA (1143bp)
protein (381aa)
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5047490 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP-dependent protease, archaeal Lon-like protein Tax=AR11
ATP-dependent protease Lon
rifcsplowo2_02_scaffold_38213_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4656..5372)
-----------------
DNA (717bp)
protein (239aa)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5048614 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATP-dependent protease, archaeal Lon-like protein Tax=AR11
ATP-dependent protease Lon
rifcsplowo2_02_scaffold_38213_8
unknown

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5436..5792
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsplowo2_02_scaffold_38213_9
Oryza glaberrima, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

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5874..6554
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA03G0103100.1}; TaxID=4538 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida;
rifcsplowo2_02_scaffold_38213_10
AR11, Woesearchaeaota, DPANN, Archaea

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6579..7058
-----------------
DNA (480bp)
protein (160aa)
Tax=AR11
rifcsplowo2_02_scaffold_38213_11
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7077..8765)
-----------------
DNA (1689bp)
protein (563aa)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKS24572.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Glutamate--tRNA ligase id=5800680 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamate-tRNA ligase
rifcsplowo2_02_scaffold_38213_12
unknown

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comp(8773..8940)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

Displaying 12 items

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