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rifcsplowo2_02_scaffold_5366

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_5366_1
unknown

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3..104
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5366_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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141..845
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003615558
btpA family protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
rifcsplowo2_02_scaffold_5366_3
Glycine max, Glycine, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(970..1887)
-----------------
DNA (918bp)
protein (306aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Uncharacterized protein n=2 Tax=Glycine max RepID=I1K354_SOYBN
Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G26170.1}; TaxID=3847 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons
rifcsplowo2_02_scaffold_5366_4
unknown

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1976..2257
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5366_5
AR19, Pacearchaeaota, DPANN, Archaea

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comp(2283..2888)
-----------------
DNA (606bp)
protein (202aa)
id=5049669 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR19
rifcsplowo2_02_scaffold_5366_6
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2876..3370)
-----------------
DNA (495bp)
protein (165aa)
Tax=AR19
rifcsplowo2_02_scaffold_5366_7
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3443..4621)
-----------------
DNA (1179bp)
protein (393aa)
GTP-binding and nucleic acid-binding protein YchF Tax=AR13
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_02_scaffold_5366_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5106..6593)
-----------------
DNA (1488bp)
protein (496aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_5366_trna_2
unknown

Not on your lists

comp(6669..6743)
-----------------
DNA (75bp)
transferRNA
rifcsplowo2_02_scaffold_5366_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6839..7156
-----------------
DNA (318bp)
protein (106aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_5366_trna_1
unknown

Not on your lists

7265..7337
-----------------
DNA (73bp)
transferRNA
rifcsplowo2_02_scaffold_5366_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7510..8916
-----------------
DNA (1407bp)
protein (469aa)
hypothetical protein n=1 Tax=Brachyspira innocens RepID=UPI00036C19DB
DNA methylase N-4/N-6 domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
DNA methylase N-4/N-6 domain-containing protein
rifcsplowo2_02_scaffold_5366_11
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

8926..9621
-----------------
DNA (696bp)
protein (232aa)
type II restriction enzyme MjaVIP (EC:3.1.21.4) Tax=RBG_13_RIF_OD1_07_37_56_curated
type II restriction enzyme MjaVIP (EC:3.1.21.4)
Putative type II restriction enzyme MjaVIP n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK13_THEYD rbh
rifcsplowo2_02_scaffold_5366_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9605..10297
-----------------
DNA (693bp)
protein (231aa)
DNA methylase domain protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK12_THEYD
DNA methylase domain protein Tax=RBG_13_Pacearchaeota_36_9_curated
DNA methylase domain-containing protein
rifcsplowo2_02_scaffold_5366_13
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

10525..11454
-----------------
DNA (930bp)
protein (310aa)
UPI0003D1B8B6 related cluster n=1 Tax=unknown RepID=UPI0003D1B8B6
Filamentation induced by cAMP protein Fic Tax=GWA2_OD1_31_28_partial
filamentation induced by cAMP protein Fic
rifcsplowo2_02_scaffold_5366_14
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


11746..12132
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S6e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY65_METFV
30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=RBG_16_Pacearchaeota_35_8_curated
30S ribosomal protein S6e
rifcsplowo2_02_scaffold_5366_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


12157..13368
-----------------
DNA (1212bp)
protein (404aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM
small GTP-binding protein; K03242 translation initiation factor 2 subunit 3 Tax=RBG_13_Pacearchaeota_36_9_curated
Translation initiation factor 2 subunit gamma
rifcsplowo2_02_scaffold_5366_16

Not on your lists

comp(13342..15162)
-----------------
DNA (1821bp)
protein (607aa)
Surface layer protein B (SlgB-2) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28859_ARCFU id=5103302 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Surface layer protein B SlgB-2
Uncharacterized protein {ECO:0000313|EMBL:KKL83812.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_02_scaffold_5366_17

Not on your lists

15253..15444
-----------------
DNA (192bp)
protein (64aa)
Glutamyl-tRNA synthetase {ECO:0000313|EMBL:KHO55294.1}; EC=6.1.1.17 {ECO:0000313|EMBL:KHO55294.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Displaying 19 items

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