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rifcsplowo2_02_scaffold_5400

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_5400_1
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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146..1417
-----------------
DNA (1272bp)
protein (424aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_13_Pacearchaeota_33_26_curated
Aspartate--tRNA ligase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VST0_METIM id=5103862 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Aspartate-tRNA ligase
rifcsplowo2_02_scaffold_5400_2
unknown

Not on your lists

1493..1783
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_3
unknown

Not on your lists

comp(1787..2404)
-----------------
DNA (618bp)
protein (206aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRV4_CHIPD id=5103539 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
NAD-dependent epimerase/dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRV4_CHIPD Tax=AR20
NAD-dependent epimerase/dehydratase
rifcsplowo2_02_scaffold_5400_4
unknown

Not on your lists

2503..3441
-----------------
DNA (939bp)
protein (313aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_5
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3443..3958)
-----------------
DNA (516bp)
protein (172aa)
Methyltransferase type 11 n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GX12_9EURY
type 11 methyltransferase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
type 11 methyltransferase
rifcsplowo2_02_scaffold_5400_6
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(3983..4162)
-----------------
DNA (180bp)
protein (60aa)
Methyltransferase type 11 n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GX12_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EFD92235.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
rifcsplowo2_02_scaffold_5400_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

4209..4472
-----------------
DNA (264bp)
protein (88aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_02_scaffold_5400_8
unknown

Not on your lists

4469..4915
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_9
unknown

Not on your lists

4912..5223
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_10
unknown

Not on your lists

5273..5767
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5751..7109
-----------------
DNA (1359bp)
protein (453aa)
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RBG_13_Pacearchaeota_36
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS48_METIM rbh
glutamyl-tRNA(Gln) amidotransferase, A subunit
rifcsplowo2_02_scaffold_5400_12
unknown

Not on your lists

7164..7985
-----------------
DNA (822bp)
protein (274aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_13
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8006..9097)
-----------------
DNA (1092bp)
protein (364aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2) Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=uncultured bacterium RepID=K2AKY7_9BACT
rifcsplowo2_02_scaffold_5400_14
unknown

Not on your lists

9300..9797
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9922..10569
-----------------
DNA (648bp)
protein (216aa)
Uncharacterized protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3B6_THEGP
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
rifcsplowo2_02_scaffold_5400_16
unknown

Not on your lists

11008..11340
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_17
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11736..12182
-----------------
DNA (447bp)
protein (149aa)
Holliday junction resolvase-like protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein id=5042332 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Holliday junction resolvase-like protein
rifcsplowo2_02_scaffold_5400_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12260..13114
-----------------
DNA (855bp)
protein (285aa)
Met-10+ like-protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGQ3_ACIB4
putative methyltransferase Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_02_scaffold_5400_19
unknown

Not on your lists

13170..13445
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5400_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13675..14397)
-----------------
DNA (723bp)
protein (241aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_5400_21
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(14457..14624)
-----------------
DNA (168bp)
protein (56aa)
Tax=CG_Pacearch_02
rifcsplowo2_02_scaffold_5400_22
GWA2_OP11_nov_40_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

14754..15383
-----------------
DNA (630bp)
protein (210aa)
One of two inversely orientated ORFs in ISC1043 Tax=GWA2_OP11_nov_40_8
Displaying 22 items

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