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rifcsplowo2_02_scaffold_4146

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_4146_1
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(114..896)
-----------------
DNA (783bp)
protein (261aa)
DNA methylase N-4/N-6 domain-containing protein Tax=RBG_16_OP11_Levybacteria_35_11_curated
DNA methylase N-4/N-6 domain protein id=4422233 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
rifcsplowo2_02_scaffold_4146_2
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(880..2706)
-----------------
DNA (1827bp)
protein (609aa)
hypothetical protein Tax=CG_Elusi_03
Putative restriction endonuclease id=3947219 bin=GWB1_CP_36_13 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
rifcsplowo2_02_scaffold_4146_3
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

2777..3604
-----------------
DNA (828bp)
protein (276aa)
DNA methylase N-4/N-6 domain protein; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
Modification methylase DpnIIB (Adenine-specific methyltransferase DpnIIB) (M.DpnIIB) (M.DpnII 2) id=1857791 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
DNA methylase N-4/N-6 domain-containing protein
rifcsplowo2_02_scaffold_4146_trna_1
unknown

Not on your lists

comp(3850..3921)
-----------------
DNA (72bp)
transferRNA
rifcsplowo2_02_scaffold_4146_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

4021..5031
-----------------
DNA (1011bp)
protein (337aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_4146_5
Candida maltosa, Candida, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(5041..5181)
-----------------
DNA (141bp)
protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EMG50041.1}; TaxID=1245528 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lo
rifcsplowo2_02_scaffold_4146_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5421..6707
-----------------
DNA (1287bp)
protein (429aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3); K03231 elongation factor 1-alpha Tax=RBG_13_Pacearchaeota_36_9_curated
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA id=5103708 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha
rifcsplowo2_02_scaffold_4146_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

7288..8448
-----------------
DNA (1161bp)
protein (387aa)
UPF0095 protein PYCH_02180 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG81_PYRYC id=5103044 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TOPRIM domain protein Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein
rifcsplowo2_02_scaffold_4146_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8518..8937
-----------------
DNA (420bp)
protein (140aa)
NusA protein-like, archaeal Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_4146_9
unknown

Not on your lists

comp(9004..9345)
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_10

Not on your lists


9383..9829
-----------------
DNA (447bp)
protein (149aa)
Marine sediment metagenome DNA, contig: S06H3_S27424 {ECO:0000313|EMBL:GAI55554.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
rifcsplowo2_02_scaffold_4146_11
unknown

Not on your lists

9831..9989
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_12

Not on your lists


9992..10687
-----------------
DNA (696bp)
protein (232aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S06H3_S03024 {ECO:0000313|EMBL:GAI24595.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S7
rifcsplowo2_02_scaffold_4146_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(10838..11086)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE5_METCG
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_02_scaffold_4146_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

11181..11522
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG id=5103719 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_02_scaffold_4146_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11656..15267
-----------------
DNA (3612bp)
protein (1204aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003662C39 rbh
translation elongation factor aef-2; K03234 elongation factor 2 Tax=RBG_13_Pacearchaeota_36_9_curated
Elongation factor 2
rifcsplowo2_02_scaffold_4146_16

Not on your lists

15338..16054
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM95370.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_02_scaffold_4146_17
unknown

Not on your lists

16412..17239
-----------------
DNA (828bp)
protein (276aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_18
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

17283..17513
-----------------
DNA (231bp)
protein (77aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z6D5_9CREN
hypothetical protein Tax=GWA2_WOR_2_47_8_curated
hypothetical protein
rifcsplowo2_02_scaffold_4146_19
unknown

Not on your lists

comp(17647..18174)
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_20
unknown

Not on your lists

18273..18764
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_21
unknown

Not on your lists

18823..19251
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_22
unknown

Not on your lists

19378..19815
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19812..21005)
-----------------
DNA (1194bp)
protein (398aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CF06F
metallophosphoesterase Tax=RBG_13_Pacearchaeota_36_9_curated
Metallophosphoesterase
rifcsplowo2_02_scaffold_4146_24
unknown

Not on your lists

21670..22191
-----------------
DNA (522bp)
protein (174aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_25

Not on your lists


22218..22826
-----------------
DNA (609bp)
protein (203aa)
dITP/XTP pyrophosphatase (EC:3.6.1.19)
Ham1 family protein; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] id=5240538 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ham1 family protein {ECO:0000313|EMBL:KKS38971.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
rifcsplowo2_02_scaffold_4146_26
unknown

Not on your lists

comp(22811..23254)
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_27
unknown

Not on your lists

comp(23329..24366)
-----------------
DNA (1038bp)
protein (346aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4146_28

Not on your lists

comp(24440..25078)
-----------------
DNA (639bp)
protein (213aa)
NEQ238 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR9_NANEQ id=5103447 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S06H3_S03919 {ECO:0000313|EMBL:GAI19904.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_02_scaffold_4146_29
unknown

Not on your lists

comp(25141..26085)
-----------------
DNA (945bp)
protein (315aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

View Taxonomy