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rifcsplowo2_02_scaffold_10741

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_10741_1
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

comp(112..864)
-----------------
DNA (753bp)
protein (251aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F7C70
transcriptional regulator TrmB Tax=CG_Micra_02
transcriptional regulator TrmB
rifcsplowo2_02_scaffold_10741_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(903..1439)
-----------------
DNA (537bp)
protein (179aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZ68_9EURY id=5103413 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_10741_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1420..2010)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein
id=5103412 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5103412 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_02_scaffold_10741_4
unknown

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2171..3334
-----------------
DNA (1164bp)
protein (388aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_5
unknown

Not on your lists

3331..4116
-----------------
DNA (786bp)
protein (262aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_6
unknown

Not on your lists

4118..4933
-----------------
DNA (816bp)
protein (272aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_7
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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5327..5518
-----------------
DNA (192bp)
protein (64aa)
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein id=18311514 bin=Haloredivivus tax=Haloredivivus
rifcsplowo2_02_scaffold_10741_8
unknown

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5497..5676
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_9
unknown

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comp(5737..6222)
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_10
R_RIF_OD1_01_42_19, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(6224..6718)
-----------------
DNA (495bp)
protein (165aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_01_42_19_curated
rifcsplowo2_02_scaffold_10741_11
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

6808..7569
-----------------
DNA (762bp)
protein (254aa)
hypothetical protein Tax=AR19
transcriptional regulator TrmB id=5048633 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator, TrmB
rifcsplowo2_02_scaffold_10741_12
RIFOXYD1_FULL_OD1_36_11_curated, Parcubacteria, Bacteria

Not on your lists

comp(7571..7903)
-----------------
DNA (333bp)
protein (111aa)
id=2823474 Tax=RIFOXYD1_FULL_OD1_36_11_curated
id=2823474 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rifcsplowo2_02_scaffold_10741_13
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(7938..8651)
-----------------
DNA (714bp)
protein (238aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2D0_9EURY id=5103661 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsplowo2_02_scaffold_10741_14
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

8771..9622
-----------------
DNA (852bp)
protein (284aa)
Putative ISmav2-like transposase id=4467404 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
transposase Tax=GWF2_Lentisphaerae_49_21_curated
ISA0963-2 transposase
rifcsplowo2_02_scaffold_10741_15
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

9702..9878
-----------------
DNA (177bp)
protein (59aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsplowo2_02_scaffold_10741_16
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

9880..10185
-----------------
DNA (306bp)
protein (102aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsplowo2_02_scaffold_10741_17
unknown

Not on your lists

10182..10790
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_18
unknown

Not on your lists

comp(10836..11213)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_19
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(11215..11610)
-----------------
DNA (396bp)
protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LK77_THEBM
hypothetical protein
rifcsplowo2_02_scaffold_10741_20

Not on your lists

comp(11589..11852)
-----------------
DNA (264bp)
protein (88aa)
Marine sediment metagenome DNA, contig: S12H4_S10502 {ECO:0000313|EMBL:GAI97093.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_02_scaffold_10741_21
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11904..12647)
-----------------
DNA (744bp)
protein (248aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Pacearchaeota_35_8_curated
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase id=3814428 bin=GWF2_Lentisphaerae_38_69 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
rifcsplowo2_02_scaffold_10741_22
unknown

Not on your lists

comp(12672..13082)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13136..14404)
-----------------
DNA (1269bp)
protein (423aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F706F
methylthioadenosine phosphorylase
rifcsplowo2_02_scaffold_10741_24

Not on your lists

comp(14457..16871)
-----------------
DNA (2415bp)
protein (805aa)
cpb:Cphamn1_1641 S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=2403 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
Adenosylhomocysteinase {ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|RuleBase:RU000548};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
adenosylhomocysteinase
rifcsplowo2_02_scaffold_10741_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16963..17922
-----------------
DNA (960bp)
protein (320aa)
RNA methylase, NOL1/NOP2/sun family (EC:2.1.1.29) Tax=RBG_13_Pacearchaeota_36_9_curated
tRNA (Cytosine-48,49-C(5)-) methyltransferase id=5800672 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
rifcsplowo2_02_scaffold_10741_26
unknown

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comp(17928..18254)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsplowo2_02_scaffold_10741_27

Not on your lists

comp(18275..18538)
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003638A45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62962.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_10741_28
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

18625..18840
-----------------
DNA (216bp)
protein (72aa)
Tax=CG_Pacearch_05
rifcsplowo2_02_scaffold_10741_29
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

18840..19229
-----------------
DNA (390bp)
protein (130aa)
Putative ribonuclease n=2 Tax=Sulfolobus tokodaii RepID=F9VNP7_SULTO
twitching motility protein PilT; K07062 Tax=CG_Pacearch_05
virulence-associated protein
Displaying 29 items

View Taxonomy