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rifcsplowo2_02_scaffold_2623

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_2623_1
unknown

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comp(149..748)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_2
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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comp(791..1681)
-----------------
DNA (891bp)
protein (297aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=5093325 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
Branched-chain amino acid aminotransferase, branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KKR25851.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KKR25851.1};; TaxID=1619064 species="Bacteria; Pereg
ilvE; Branched-chain-amino-acid aminotransferase (EC:2.6.1.42)
rifcsplowo2_02_scaffold_2623_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(1747..2454)
-----------------
DNA (708bp)
protein (236aa)
Integral membrane protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAP5_9EURY
hypothetical protein; K06384 stage II sporulation protein M Tax=RBG_16_Pacearchaeota_35_8_curated
integral membrane protein
rifcsplowo2_02_scaffold_2623_4

Not on your lists

comp(2836..3291)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50867.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsplowo2_02_scaffold_2623_5
AR1, Pacearchaeaota, DPANN, Archaea

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comp(3267..3719)
-----------------
DNA (453bp)
protein (151aa)
Putative membrane protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K695_CLOPA
hypothetical protein Tax=AR1
hypothetical protein
rifcsplowo2_02_scaffold_2623_6
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(3721..4512)
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D7941
transcription initiation factor E subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha Tax=RBG_16_Pacearchaeota_35_8_curated
Transcription factor E
rifcsplowo2_02_scaffold_2623_7
AR1, Pacearchaeaota, DPANN, Archaea

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5174..5695
-----------------
DNA (522bp)
protein (174aa)
Tax=AR1
rifcsplowo2_02_scaffold_2623_8

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5697..6038
-----------------
DNA (342bp)
protein (114aa)
Marine sediment metagenome DNA, contig: S06H3_S19010 {ECO:0000313|EMBL:GAI51275.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_02_scaffold_2623_9
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

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6072..6755
-----------------
DNA (684bp)
protein (228aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] id=5041873 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_02_scaffold_2623_10
GWB1_OP11_39_12, Woesebacteria, Microgenomates, Bacteria

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7107..7685
-----------------
DNA (579bp)
protein (193aa)
3-oxoacyl-ACP reductase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZR31_THELI
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KKR00725.1}; TaxID=1618574 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_12.;"
3-oxoacyl-ACP reductase
rifcsplowo2_02_scaffold_2623_11
R_WWE3_42_13, WWE3, Bacteria

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7682..7846
-----------------
DNA (165bp)
protein (55aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPHIGHO2_01_FULL_WWE3_42_13_curated
rifcsplowo2_02_scaffold_2623_12
CG_Pacearch_03, Pacearchaeota, Archaea

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7929..9707
-----------------
DNA (1779bp)
protein (593aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Pacearch_03
Alanine--tRNA ligase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RSZ5_SPHGB id=5102916 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Alanine-tRNA ligase
rifcsplowo2_02_scaffold_2623_13
unknown

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comp(9724..10005)
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10058..10390
-----------------
DNA (333bp)
protein (111aa)
Transcriptional regulator, MarR family n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46A74_METBF
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AAZ71218.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Me
rifcsplowo2_02_scaffold_2623_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(10379..10759)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUB7_9ARCH
hypothetical protein
Uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_2623_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(10756..10959)
-----------------
DNA (204bp)
protein (68aa)
id=5050671 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5050671 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_02_scaffold_2623_17

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comp(11053..11577)
-----------------
DNA (525bp)
protein (175aa)
ADP-ribose pyrophosphatase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] id=5045295 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KHO54502.1}; EC=3.6.1.13 {ECO:0000313|EMBL:KHO54502.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
ADP-ribose pyrophosphatase
rifcsplowo2_02_scaffold_2623_18
unknown

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11639..11788
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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12039..12281
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein Tax=CG_Aenigma_01
seg 30..55 id=16700 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
rifcsplowo2_02_scaffold_2623_20
unknown

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comp(12357..12773)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_21
unknown

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comp(12847..13479)
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_22
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(13545..13940)
-----------------
DNA (396bp)
protein (132aa)
id=2719729 Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsplowo2_02_scaffold_2623_23
unknown

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13982..14317
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_24
unknown

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14377..14793
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_25
unknown

Not on your lists

comp(14907..15554)
-----------------
DNA (648bp)
protein (216aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_26
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

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15636..15833
-----------------
DNA (198bp)
protein (66aa)
hypothetical protein Tax=RBG_16_RIF03_38_11_curated
Putative uncharacterized protein id=3362451 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
rifcsplowo2_02_scaffold_2623_27
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists


comp(15867..19199)
-----------------
DNA (3333bp)
protein (1111aa)
leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CE9F8
leuS; leucyl-tRNA synthetase
rifcsplowo2_02_scaffold_2623_28
CG_Woesearch_02, Woesearchaeota, Archaea

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19315..20268
-----------------
DNA (954bp)
protein (318aa)
calcium/cation antiporter; K07301 inner membrane protein Tax=CG_Woesearch_02
K+-dependent Na+/Ca+ exchanger related-protein id=5800688 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_02_scaffold_2623_29
unknown

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comp(20414..21007)
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2623_30
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

21184..22128
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein
id=5103053 Tax=CG_Pacearch_05
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Displaying items 1-30 of 40 in total

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