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rifcsplowo2_02_scaffold_3010

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_3010_1

Not on your lists

2..481
-----------------
DNA (480bp)
protein (160aa)
id=5046010 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45820.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_02_scaffold_3010_2

Not on your lists

879..1133
-----------------
DNA (255bp)
protein (85aa)
Putative uncharacterized protein id=5046867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54260.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_02_scaffold_3010_3

Not on your lists

1150..1290
-----------------
DNA (141bp)
protein (47aa)
Marine sediment metagenome DNA, contig: S06H3_S00525 {ECO:0000313|EMBL:GAI26278.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_02_scaffold_3010_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1878..3575
-----------------
DNA (1698bp)
protein (566aa)
id=5046011 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5046011 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_02_scaffold_3010_5
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

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3581..6955
-----------------
DNA (3375bp)
protein (1125aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7J5_METEZ
PE-PGRS family protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
hypothetical protein
rifcsplowo2_02_scaffold_3010_6
unknown

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7105..7995
-----------------
DNA (891bp)
protein (297aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3010_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(8262..9026)
-----------------
DNA (765bp)
protein (255aa)
hypothetical protein id=14425946 bin=bin1_lowGC species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein
rifcsplowo2_02_scaffold_3010_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(9051..9662)
-----------------
DNA (612bp)
protein (204aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTD5_9RHIZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
rifcsplowo2_02_scaffold_3010_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9881..10918)
-----------------
DNA (1038bp)
protein (346aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_3010_10
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(11130..11909)
-----------------
DNA (780bp)
protein (260aa)
hypothetical protein Tax=AR13
Membrane protein containing DUF1616 id=5090932 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
rifcsplowo2_02_scaffold_3010_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11924..13504)
-----------------
DNA (1581bp)
protein (527aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70617.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
rifcsplowo2_02_scaffold_3010_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13506..15101)
-----------------
DNA (1596bp)
protein (532aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70620.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
transmembrane_regions id=5802851 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
rifcsplowo2_02_scaffold_3010_13
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(15274..15744)
-----------------
DNA (471bp)
protein (157aa)
HEPN domain protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0X7_9EURY
HEPN domain-containing protein Tax=CG_Woesearch_01
HEPN domain-containing protein
rifcsplowo2_02_scaffold_3010_14
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(15734..16312)
-----------------
DNA (579bp)
protein (193aa)
hypothetical protein
DNA polymerase beta domain protein region Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
id=5103861 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_02_scaffold_3010_15
unknown

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comp(16349..16477)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3010_16
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16477..16683)
-----------------
DNA (207bp)
protein (69aa)
Tax=AR19
rifcsplowo2_02_scaffold_3010_17
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

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comp(16723..17649)
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B5F12
hypothetical protein; K07027 Tax=RBG_16_OP11_Levybacteria_35_11_curated
hypothetical protein
rifcsplowo2_02_scaffold_3010_18
unknown

Not on your lists

comp(17633..19126)
-----------------
DNA (1494bp)
protein (498aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) PF0_THES4">RepID=G0HPF0_THES4 id=5103417 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) PF0_THES4">RepID=G0HPF0_THES4 Tax=AR20
hypothetical protein
rifcsplowo2_02_scaffold_3010_19
GWA1_OP11_33_33, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(19123..19872)
-----------------
DNA (750bp)
protein (250aa)
type 11 methyltransferase n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248E984
Methyltransferase type 12 {ECO:0000313|EMBL:KKP51075.1}; TaxID=1618543 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_33_33.;"
type 11 methyltransferase
rifcsplowo2_02_scaffold_3010_20
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19869..21152)
-----------------
DNA (1284bp)
protein (428aa)
Glycosyl transferase group 1 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RFS4_DESPD rbh
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADW18235.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobu
rifcsplowo2_02_scaffold_3010_21
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

21254..21550
-----------------
DNA (297bp)
protein (99aa)
Putative uncharacterized protein Tax=AR19
rifcsplowo2_02_scaffold_3010_22
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

21544..21783
-----------------
DNA (240bp)
protein (80aa)
Putative uncharacterized protein id=5046867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR19
rifcsplowo2_02_scaffold_3010_23
R_OP11_Curtissbacteria_41_44, Curtissbacteria, Microgenomates, Bacteria

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comp(21776..22081)
-----------------
DNA (306bp)
protein (102aa)
glycosyltransferase (EC:2.4.1.-); K00754 [EC:2.4.1.-] Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_44_curated
Glycosyl transferase group 1 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RFS4_DESPD
group 1 glycosyl transferase
rifcsplowo2_02_scaffold_3010_24
unknown

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22381..22545
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3010_25
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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22533..22823
-----------------
DNA (291bp)
protein (97aa)
virulence-associated protein; K07062 Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
rifcsplowo2_02_scaffold_3010_26
unknown

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comp(23007..23189)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3010_27
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(23320..23841)
-----------------
DNA (522bp)
protein (174aa)
Tax=AR13
rifcsplowo2_02_scaffold_3010_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23974..24789)
-----------------
DNA (816bp)
protein (272aa)
putative UDP-glucose/GDP-mannose dehydrogenase (EC:1.1.1.22)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase {ECO:0000313|EMBL:AIF84443.1}; EC=1.1.1.336 {ECO:0000313|EMBL:AIF84443.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphae
TrkA-N domain-containing protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5Z3_9ARCH
rifcsplowo2_02_scaffold_3010_29
R_OP11_Curtissbacteria_41_44, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(25016..26020)
-----------------
DNA (1005bp)
protein (335aa)
family 2 glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_44_curated
family 2 glycosyl transferase
family 2 glycosyl transferase id=5241091 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_02_scaffold_3010_30
unknown

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comp(26240..26404)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

Displaying 30 items

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