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rifcsplowo2_02_scaffold_19738

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_19738_1
unknown

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comp(119..448)
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

rifcsplowo2_02_scaffold_19738_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


comp(535..3081)
-----------------
DNA (2547bp)
protein (849aa)
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=CG_Pacearch_05
DNA gyrase subunit A id=7200488 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
gyrA; DNA gyrase subunit A
rifcsplowo2_02_scaffold_19738_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3164..4948)
-----------------
DNA (1785bp)
protein (595aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RBG_13_Pacearchaeota_36_9_curated
DNA gyrase subunit B n=1 Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ id=5103759 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA gyrase subunit B
rifcsplowo2_02_scaffold_19738_4
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(4941..5897)
-----------------
DNA (957bp)
protein (319aa)
Endonuclease-like orf Tax=CG_Pacearch_05
Endonuclease-like orf id=5049725 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_02_scaffold_19738_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(6347..6640)
-----------------
DNA (294bp)
protein (98aa)
30S ribosomal protein S28 Tax=RBG_13_Pacearchaeota_36_9_curated
30S ribosomal protein S28e id=5800776 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S28e
rifcsplowo2_02_scaffold_19738_6
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


comp(6696..7010)
-----------------
DNA (315bp)
protein (105aa)
rpl7ae; 50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=CG_Pacearch_04
50S ribosomal protein L7Ae id=5800777 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl7ae; 50S ribosomal protein L7
rifcsplowo2_02_scaffold_19738_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7323..7580)
-----------------
DNA (258bp)
protein (86aa)
Tax=AR19
rifcsplowo2_02_scaffold_19738_8
unknown

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comp(7628..7786)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsplowo2_02_scaffold_19738_9
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(7788..8819)
-----------------
DNA (1032bp)
protein (344aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Pacearch_05
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
rifcsplowo2_02_scaffold_19738_10
unknown

Not on your lists

8870..9190
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsplowo2_02_scaffold_19738_11
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9268..9999)
-----------------
DNA (732bp)
protein (244aa)
UPF0264 protein O166_12020 n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1AJP9_9NEIS
hypothetical protein
UPF0264 protein UF16_08550 {ECO:0000256|HAMAP-Rule:MF_00681}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacter
rifcsplowo2_02_scaffold_19738_12
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10107..10967
-----------------
DNA (861bp)
protein (287aa)
id=5042256 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_02_scaffold_19738_13
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

11127..11588
-----------------
DNA (462bp)
protein (154aa)
coiled-coil 3..24 Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
coiled-coil 3..24 id=13489 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
rifcsplowo2_02_scaffold_19738_14
unknown

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comp(11585..11857)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

Displaying 14 items

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