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rifcsplowo2_02_scaffold_25494

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_25494_1

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comp(112..642)
-----------------
DNA (531bp)
protein (177aa)
Marine sediment metagenome DNA, contig: S06H3_L02822 {ECO:0000313|EMBL:GAI05144.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_02_scaffold_25494_2
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(780..4313)
-----------------
DNA (3534bp)
protein (1178aa)
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=CG_Pacearch_05
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_02_scaffold_25494_3
unknown

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comp(4315..4626)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsplowo2_02_scaffold_25494_4
unknown

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comp(4628..4975)
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

rifcsplowo2_02_scaffold_25494_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4968..6032)
-----------------
DNA (1065bp)
protein (355aa)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719CEA
DNA-directed RNA polymerase
rifcsplowo2_02_scaffold_25494_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(6029..8092)
-----------------
DNA (2064bp)
protein (688aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_13_Pacearchaeota_33_26_curated
DNA-directed RNA polymerase n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QWN8_VULM7
DNA-directed RNA polymerase subunit B
rifcsplowo2_02_scaffold_25494_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(8122..8334)
-----------------
DNA (213bp)
protein (71aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=11 Tax=Haloferax RepID=D4GZX3_HALVD
DNA-directed RNA polymerase, subunit H, RpoH/RPB5 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_25494_8

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8766..9020
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CC000
Marine sediment metagenome DNA, contig: S01H1_L07352 {ECO:0000313|EMBL:GAF70933.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L35
rifcsplowo2_02_scaffold_25494_9
unknown

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9022..9162
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsplowo2_02_scaffold_25494_10
unknown

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9164..9595
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

rifcsplowo2_02_scaffold_25494_11
CG_Pacearch_03, Pacearchaeota, Archaea

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9620..10159
-----------------
DNA (540bp)
protein (180aa)
rpl10e; 50S ribosomal protein L10; K02866 large subunit ribosomal protein L10e Tax=CG_Pacearch_03
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e id=5050385 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
large subunit ribosomal protein L10e
rifcsplowo2_02_scaffold_25494_12
unknown

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10196..10465
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

Displaying 12 items

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