ggKbase home page

rifcsplowo2_02_scaffold_3720_9

Organism: RIFCSPLOWO2_02_FULL_Archaea_Pacearchaeota_30_10

near complete RP 31 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 31 / 38 MC: 3
Location: 4207..4914

Top 3 Functional Annotations

Value Algorithm Source
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 227.0
  • Bit_score: 264
  • Evalue 8.50e-68
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=RBG_13_Pacearchaeota_36_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 228.0
  • Bit_score: 299
  • Evalue 5.70e-78
exosome complex exonuclease Rrp41 similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 227.0
  • Bit_score: 264
  • Evalue 2.40e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Pacearchaeota_36_9_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 708
ATGGCATACACAAAACGTTTAGACGGAAGAAAATTTGATGAGCTAAGACCTATAAAAGCAGAAGTTGGTGTTATTCCTAATGCTGATGGAAGTGCGTTATTTGCGTTTGGAGAAACACTTGTTATTGCAGCAGTTTATGGTCCAAGGCCATTACATCCTGCTCATATGCAAGAGCCAGATAGAGGGATTATTAGATGTGAGTATAACATGTTGCCTTTTTCAGTTTCAGAAAGAGCAAGACCTGGACCAAGCAGAAGAAGCAAAGAGATAAGCATGATAACTGCTAACGCGTTATCTTCTATTGTTGATTTAACAAGATTTCCAGGAACAGTTATTGATGTTCAAATTTTAATTATTCAGGCAAACGCATCAACGAGATGTGCAGGAATAAACGCAGCTTCTATGGCTTTAGCACATGCAGGAATTGTCATGAAAGAACTTGTCAGTAGTGTTTCTATTGGAAAAATAGATGATAAGATAGTAGTAGACGTTGATAAAAAAGAAGAAGATTATAGTGATGGAGAAGGAAGTACTGACATTCCGTTTACACTAACTTCCAGAAGTAAAAGTATTGTTCATCTTCAATTAGATGGAAAAATTCCTTTAAAAAGATTTAAGGAAGCTTTTTTAGCTGCAAAAACTGCGTGTGAAAAAATATTGAAATATCAAGAGAGAGCATTGAAAGGAGAGAAAATAAATGAAAATTAA
PROTEIN sequence
Length: 236
MAYTKRLDGRKFDELRPIKAEVGVIPNADGSALFAFGETLVIAAVYGPRPLHPAHMQEPDRGIIRCEYNMLPFSVSERARPGPSRRSKEISMITANALSSIVDLTRFPGTVIDVQILIIQANASTRCAGINAASMALAHAGIVMKELVSSVSIGKIDDKIVVDVDKKEEDYSDGEGSTDIPFTLTSRSKSIVHLQLDGKIPLKRFKEAFLAAKTACEKILKYQERALKGEKINEN*