ggKbase home page

rifcsplowo2_02_scaffold_2669_17

Organism: RIFCSPLOWO2_02_FULL_Woesearchaeota_32_17

near complete RP 37 / 55 MC: 1 BSCG 23 / 51 ASCG 32 / 38 MC: 1
Location: comp(9383..10159)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 259.0
  • Bit_score: 291
  • Evalue 9.30e-76
DNA-directed RNA polymerase subunit D similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 258.0
  • Bit_score: 291
  • Evalue 2.60e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR20 → Archaea

Sequences

DNA sequence
Length: 777
ATGAAAGTAGAAGTTATAAATAAATCAGAGAATGAACTTGTTTTTACTATTGATAATATTAATCCTGTAATAGCAAATACTCTTAGAAGAACAATCTTTGTTGAAGTCCCGGTTATGGCAATAAAAGAAGTTGAATTCAGAAAGAACAGTTCAGCTTTATTTGATGAAATTCTTTCTCATAGACTTGGGTTAGTTCCTTTAACTACTGATTTAAAATCTTATAATTTACCTGATGAATGTAAATGTAAAGGAGAGGGATGCGCGCTATGCCAGGTCGAATTGTTTTTATTTTTGAAAGAAGAGGGCATGGTCTATTCTAAAGATATTGATAGCAAAGATCCTAAAATTAAACCTGCTATTGCTGAGATTCCTATTGTTGAATTAAATAAGGGGCAGAAATTAGAATTTGTTGCTACTGCTGTTTTGGGAAGAGGAAAAGAGCACATGAAATTCAGCCCAGGTCATATTTACTATAAAGGATATCCTGAATTTAATATTGAGAATAAAAGTAAAGCTAAAGAAGCTATTAAATTGTGCAAAGGTCTATTAGTTGAGAAAGGAGACAAAGTTGAGATTACTGATTTTATGAAATGGAATGATGCATGCGAGCAGTTTTGCGAGGAGAATGGAGTTAAGATAAACTACAGCGATACTAAATTTATATTTTTCTTAGAAAGCTGGGGGCAATTAGAACCAAAAGAAATTGTTATGACTGCTTTAGATATTTTAGATAAGAAATTAATAGATTTTGAAAAGAGTTTTTCTAAAGCAAAGTAA
PROTEIN sequence
Length: 259
MKVEVINKSENELVFTIDNINPVIANTLRRTIFVEVPVMAIKEVEFRKNSSALFDEILSHRLGLVPLTTDLKSYNLPDECKCKGEGCALCQVELFLFLKEEGMVYSKDIDSKDPKIKPAIAEIPIVELNKGQKLEFVATAVLGRGKEHMKFSPGHIYYKGYPEFNIENKSKAKEAIKLCKGLLVEKGDKVEITDFMKWNDACEQFCEENGVKINYSDTKFIFFLESWGQLEPKEIVMTALDILDKKLIDFEKSFSKAK*